Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0200 ATGGCTGTTCAACTCACCCCATCGGCGATAACCACAATTTGCTCGAACCATTTCAGTTCGATTGAGAATCTGAAGCCGGTTTTGCAAGTAATCCACGTGAAGCTTTTCCCGTCGCAGGACAGGTACTGCTTGGTGCTCTCCGATGGCTCTCACTACCAGCAGTCTATACTCGCCACCAAGAAGAACCACTTGCTCACTTCCGGCACCTTGCAGACTGGTTCCATCATCGTCCTCACTTTGTTCACCACCTCCGTTATCCAGAACAGCACGATTATCATCATCGTTGATCTAGATGTGATACTTAAGAAATGTAATCCGATTGGAACTCCTGTGTCAGCAAATTTTGATGAATCTTATGCAAATCGAAACATGGGTTTCTGCAATCCTGAATCTCAGGCTTCAATAAGCCCCTTTCAAAATTCATATGTTCATCAACCTCAGCCCATGCATCAACAGCCAATGAAAATGCCCGAGGCAAAGGAAAATTTCACACCATCAGTTTGCTTGGATATTCAAGCTGTCTGGAAGCGGTGTGAAACCGTTGAAAAGGAAGTTCAATCATTAAAAGATAGTTTGTCCCTCATCAACAGGAAGGATTCAGAACAAAGAAAGCAGATAGAAGACCTTCGGAAGCAGAATGCAGAGTTGGCAGGCGAGAAACAGCGACTCCTACAAGCGATTCAAGGAATTTTGTCGGATAATCGAAGGATCTAA 714 0.4454 MAVQLTPSAITTICSNHFSSIENLKPVLQVIHVKLFPSQDRYCLVLSDGSHYQQSILATKKNHLLTSGTLQTGSIIVLTLFTTSVIQNSTIIIIVDLDVILKKCNPIGTPVSANFDESYANRNMGFCNPESQASISPFQNSYVHQPQPMHQQPMKMPEAKENFTPSVCLDIQAVWKRCETVEKEVQSLKDSLSLINRKDSEQRKQIEDLRKQNAELAGEKQRLLQAIQGILSDNRRI* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0200 237 Coils Coil 178 226 - -
Ahy5g0200 237 Gene3D - 3 114 IPR012340 -
Ahy5g0200 237 SUPERFAMILY Nucleic acid-binding proteins 1 107 IPR012340 -
Ahy5g0200 237 Pfam Replication factor-A protein 1, N-terminal domain 5 100 IPR007199 GO:0003677|GO:0005634|GO:0006260
Ahy5g0200 237 PANTHER PROTEIN CYCLOPS 155 236 IPR040036 GO:0005634|GO:0036377|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0200 Ahy-Chr5 2323277 2325535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0200 1 134 Core DNA Replication Machinery Family AT4G19130 36.170 3.66e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0200 - K07466 adu:107487113 447.588