Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0189 ATGATTAGCATCACAACCGACGAGCTTGCAACTCTTTGGGGCGTCCACTCGCAGATTCAAGAGCTGTCAGGGAACCTTGCTGCAATCCACGCAGTGCTCCAAGATGCTGAAGAGAAGCAGATCAGAGAGCGTGCTGTGAAGCTTTGGCTGCAGAAGCTTTCAGATGCAGCTCACGTGCTTGATGATATCTTAGATGAATGTTCAATAGAGTCCAACCGTCTACACAGTGACCAGTGCTTAACTCGTCTTGATCCTGTGACGATTATTTTTCGTCGAGACATCGGTAAGAGGATGAAAGAGATGGTTGACAGGTTTCGTCAAATTGATGAAGAAAGGAGAAGGTTTGAATTGCGTGGAAGAGTTCCAGAGAGGCAACAAGAGAATGAAGCATGGCGCCAGACATGTTCTGGTATCACTGAGCACAAGATCTATGGAAGGGAGCAAGACACAGAAAATATTGTGGAGTTTCTTTCAAGGAGTGCTGATAGCAGTAACGACCTCTCTGTTTATCCAATTGTTGGCATGGGGGGACTTGGAAAAACAACACTTGTCCAATGGGTTTACAATGACAAGAAGGTAATTGAACATTTCCATCTGAGAATTTGGGTTTGTGTTTCCACTGAATTCAATACCATGAGAATTCTAGAGTCCATTGTGGAATCTACAAGTGGACATAACCCGAACCTCTCTACTTTAGAAGCACTGAAAAACAAAGTTCAAGAAATACTGCTAGGCAAAAGGTATTTACTTGTTCTAGACGATATGTGGAGCACGGACAAATGGGAGGACTTGAAGTCTGTTTTGCTTTGCGGAGGTGGAACAAAAGGTGCTGCAGTTTTGGTCACTACCCGAGTTGAGAGTGTTGCATCTGTCATGGGAACATGCCCTGCTCATCACTTGTCACCGTTATCCCAGGATGACAATTGGTTATTGTTCAAATACCATGCATTTGGATCAGACAAAGTGGAGCGCAGAGAGCTTGTGGCAATAGGCAAGGAGATTGTAAAGAAATGTGGTGGTTCCCCTCTTGCATCTAAAGCACTTGGAAGCCTTTTGCGCAATAAAAAAGAGGAAATACAGTGGGTGAATGTATTGGAAAGTAAGTTTTGGGACATACTTGAGGATGATGCTATTATTGTACGTGCTTTGAAAATCAGCTACTTCCATTTGAAGTTGTCATTAAGACAATGCTTTGCTTTTTGTGCCATTTTCCCCCAAGATTTTCGAATGGAAAAAGAGCAACTTATTCATCTTTGGATGGCCAATGGTTTGATCAAATCCAAAGGGAAGTTGGAGATTGAGGATGTTGGTAATGAGGCTTGGGAGGAATTATGTCAGAGATCATTTTTCCAAGAAGTTGAGATTGATGAATTGGGAAGAACTACATTCAAGATGCATGATTTATTTCATGAACTTGCCCAATCCATAATGGGAGAAGAGTGCAGAGTTTATGATGAGTCTGCAAGCTTGACCAATTTGTCTACAAGGGTCCACCATGTCACTTGTTTAAAACCAGAGATGGAGGTAAACATGGATCCCTTCAAGAAAGCTGAATCCTTGAGGAGTATGATTAATCTTCATCCATTTGATCATCGCAATCTTAATGGGTTGCCACCATTCAATTCTCTCCGTGCACTACGTACAAATGCTTCTCAACTCTCAGCACTGAAGAGTTTAACGCATTTGAGGTACCTAAATCTGCGTAGGAGCGGTATCACAACACTGCCTGAATGTGTTTCGAGGTTACAAAAATTGCAGATTCTGAAGTTAGAAGACTGTCTATATCTTTCTTGTTTGCCCAAACACTTAACACAATTGAAAGATCTTAGACATCTCCTAATTGAAGAATGTCATTCATTAGTAGAGATGCCTCCGAATATCGGGGAGTTGAAATGTTTGAGAACATTGAATCTTTTTATTGTGGATAAAAAGGAAGGGCGTGGGTTATCAGAGTTGCGTGATTTACAGCTTGGAGGCAAACTACGCATCAAGGGGCTTGAAAATGTCATAAATGAGGGTGATGCTAGAGATGCTAATTTGAGTGCTAAGAAGAAGTTGGAAAACTTATACCTGTCATGGGGCTCCTCTGATTCAAGGCGTGGTGCCAATGCTGAGAGAATACTTGAAGCCCTTGAGCCTCCCTCCAATCTCAAGAGTTTTGGGATGAATGGTTACAGCGGAGTAGAGTTGCCTAGCTGGATGCAAAATACTTCAATTCTTTCCAGCTTAGTTATGGTGATACTCTATGATTGCAAGAACTGCAAGCACCTTCCTCCGCTGGGTAAATTACCACATTTAACTGTTCTTTATGTATCTGGAATGAAAGATGTGAAGTACATCGATGAGGACTCATATGATGGCGTGGATGAGAAGGCATTCAAATCGTTGAAGGACCTGACCTTATCGAAGCTGCCAAACTTGGAAGGGATGTTACGAGATGAAAGAGTAGAAATGCTTCCAGTTCTTTCTAAATTAAGGGTCTCGTGTGTCCCTAAGATTAAGTTGCCACTCCTTCCATCTCTAGAGCACATTTGGATTGAAGGAACAGGGTCAGACTCTGATCATGGTGATAGTGATAGTGAAGACATGGCTTTGTCTTTCCTGGAAGCTATTGTGGAGAATATGCGTCGTGTTAAGGTCCTCCATATTGAACACTTTCCTACACTCAAGGCATTACCCCATGAACTAGGCAGCCTCAATTCACTACAAGAGTTAGAACTCTACTTTTGCGATAGACTTGAGTCTTTTTCAGAGAACGTGGTGCAAGGTTTGGGTTCACTTCGAACTTTGACTATTAATCGTTGTAAGGAACTGAAATCTTTGTCTGAAGGTGTGAGACATCTAACTTGTCTGGAGCGCCTTGATATCATATACTGTCCAAAGCTGGTGACTCTACCGAGTAGCATGAATCAGCTAGTTTCCCTTCGTCATAGTTTCATCTGTTCTTGTGATACATTGCCAGAAGGCTTACAACATGTCCCTTCCCTCCAAAGTTTGGATGTGTGTGACATACGTTCAATTCCTGAGTGGTTGGGGGACTTAACTTCTCTTCAAAAGTTACGTCTCTCCAGTAAGGGGTTAAGGTCACTGCCCAGTAGCATCCGAAACCTGCCCAACTTGCGTGAGCTATCTATTGATGGGTGCCATAAGGAGCTGCAGAAGCGATGCACCAAAGTAACAGGACAGGATTGGCAGGCCATTGCTCACATCCCACAATTCAAACTGGTTCCCATTCATGAAGAAACATTTTCTGATAAAATCAGATCCAAATGGAGATCATGGCAGCTAAGAAGAGATCGACGTCGTCATCATTTCAATATGTTTGACTATCTGGTTGAAGGGATCTTTTATTACAATATGTGA 3363 0.424 MISITTDELATLWGVHSQIQELSGNLAAIHAVLQDAEEKQIRERAVKLWLQKLSDAAHVLDDILDECSIESNRLHSDQCLTRLDPVTIIFRRDIGKRMKEMVDRFRQIDEERRRFELRGRVPERQQENEAWRQTCSGITEHKIYGREQDTENIVEFLSRSADSSNDLSVYPIVGMGGLGKTTLVQWVYNDKKVIEHFHLRIWVCVSTEFNTMRILESIVESTSGHNPNLSTLEALKNKVQEILLGKRYLLVLDDMWSTDKWEDLKSVLLCGGGTKGAAVLVTTRVESVASVMGTCPAHHLSPLSQDDNWLLFKYHAFGSDKVERRELVAIGKEIVKKCGGSPLASKALGSLLRNKKEEIQWVNVLESKFWDILEDDAIIVRALKISYFHLKLSLRQCFAFCAIFPQDFRMEKEQLIHLWMANGLIKSKGKLEIEDVGNEAWEELCQRSFFQEVEIDELGRTTFKMHDLFHELAQSIMGEECRVYDESASLTNLSTRVHHVTCLKPEMEVNMDPFKKAESLRSMINLHPFDHRNLNGLPPFNSLRALRTNASQLSALKSLTHLRYLNLRRSGITTLPECVSRLQKLQILKLEDCLYLSCLPKHLTQLKDLRHLLIEECHSLVEMPPNIGELKCLRTLNLFIVDKKEGRGLSELRDLQLGGKLRIKGLENVINEGDARDANLSAKKKLENLYLSWGSSDSRRGANAERILEALEPPSNLKSFGMNGYSGVELPSWMQNTSILSSLVMVILYDCKNCKHLPPLGKLPHLTVLYVSGMKDVKYIDEDSYDGVDEKAFKSLKDLTLSKLPNLEGMLRDERVEMLPVLSKLRVSCVPKIKLPLLPSLEHIWIEGTGSDSDHGDSDSEDMALSFLEAIVENMRRVKVLHIEHFPTLKALPHELGSLNSLQELELYFCDRLESFSENVVQGLGSLRTLTINRCKELKSLSEGVRHLTCLERLDIIYCPKLVTLPSSMNQLVSLRHSFICSCDTLPEGLQHVPSLQSLDVCDIRSIPEWLGDLTSLQKLRLSSKGLRSLPSSIRNLPNLRELSIDGCHKELQKRCTKVTGQDWQAIAHIPQFKLVPIHEETFSDKIRSKWRSWQLRRDRRRHHFNMFDYLVEGIFYYNM* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0189 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 401 IPR027417 -
Ahy5g0189 1120 Gene3D Ribonuclease Inhibitor 835 979 IPR032675 -
Ahy5g0189 1120 Pfam Rx N-terminal domain 3 76 IPR041118 -
Ahy5g0189 1120 Gene3D Ribonuclease Inhibitor 980 1059 IPR032675 -
Ahy5g0189 1120 Gene3D Ribonuclease Inhibitor 488 834 IPR032675 -
Ahy5g0189 1120 SMART LRR_typ_2 559 582 IPR003591 -
Ahy5g0189 1120 SMART LRR_typ_2 1014 1037 IPR003591 -
Ahy5g0189 1120 Pfam NB-ARC domain 146 366 IPR002182 GO:0043531
Ahy5g0189 1120 PRINTS Disease resistance protein signature 242 256 - -
Ahy5g0189 1120 PRINTS Disease resistance protein signature 922 938 - -
Ahy5g0189 1120 PRINTS Disease resistance protein signature 338 352 - -
Ahy5g0189 1120 PRINTS Disease resistance protein signature 169 184 - -
Ahy5g0189 1120 Gene3D - 127 295 IPR027417 -
Ahy5g0189 1120 CDD RX-CC_like 6 108 IPR038005 -
Ahy5g0189 1120 Gene3D - 393 475 IPR036388 -
Ahy5g0189 1120 Coils Coil 19 39 - -
Ahy5g0189 1120 SUPERFAMILY L domain-like 464 847 - -
Ahy5g0189 1120 PANTHER OS10G0130600 PROTEIN 20 938 - -
Ahy5g0189 1120 PANTHER DISEASE RESISTANCE PROTEIN RP 20 938 IPR044974 GO:0006952
Ahy5g0189 1120 SUPERFAMILY RNI-like 838 1095 - -
Ahy5g0189 1120 Gene3D - 1 113 - -
Ahy5g0189 1120 Gene3D - 302 391 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0189 Ahy-Chr5 2196205 2203262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0189 166 652 WRKY Transcription Factor Family AT5G45050 24.354 2.20e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0189 - - ahf:112747502 1946.78