Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0188 ATGGCAACCGATGCTTTGCTTGGAATTCTGATTGGAAACTTGAACACTTTTGTCCAGAATGAGATTGCAGCACTTTCTGGTGTTGACTCGCAGATCCAAGACCTGTCTGAAAATCTCAGTGCAATCCGTGCGTTATTCCAAGATGCTGCAGAGGAGCAATTTACAAGCCATGGCATGAAGGACTGGCTGAATAAACTTTCTGATGCCATGCACGTGCTGGAAGATATCTTGGAAGAATGTTCAATGGAATCCAACCGTCTTCAAAGTGGAGGGTGGCTAGCCCGCTTCCATCCCAAGACAATTTTGTTTCATCATGCTATCAGCAAGAGGATCAAAGACATGGTCAAGAGGTTCCAACGTATTGAAGAAGAAAGGAGGAGGTTTCAACTGCCTGTGAGAGTCACCCAGAGGCAACAAGAAGATGATGATCAGCGTCAAACTATTTCTTCCATCCCTGAGCACCCTATGTATGGAAGAGTCAAAGATAAAGAGAAGATTGTAGACTTTCTCACCAAGCATGCCTGTTGCAATGATGGTGTCTCTGTGTATCCCGTTGTTGGTATGGGGGGTCTCGGAAAAACAACACTTTGTCGATGGGTCTTCAACCATGACAAGGTGATCCAACATTTTGATTTGAGAATTTGGGTTTGTGTCTCTACTAACTTCAATATGATGAGAATCCTAGAGTATATTCTAGAATCTACCACTGGACAGAACCCGAACCTCTCCACCTTAGAAGCAATGCAAAACAAAGTTCAACAAGTACTGCTGGGAAAACGGTATTTGCTCGTTCTAGATGATGTGTGGGACAATGTCAAATGGGAGGATCTGAAGTCTGTGTTGAATTGTAGAGGTAGTGGAATCAAAGGAGTTTCAGTTTTGGTCACCACACGAGATCCGAGTGTGGCATCTGTCATGACACCATGCAATAGTCATCACTTGCAGCCTTTAACTGAGAATGACAATTGGTCATTGTTCACACACTATGCATTTGGTCTAAACAACCAGCAGCCTGCAAAGCTGGTGGAGATTGGCAAGGAGATTGTGCGAAGATGCGTGGGTAATCCTCTGGCATCCAAAGTTCTTGGAAGCCTTTTGCGCAATAAAAAAGAGGAAAAACACTGGCTCAATGTGTTGGAAAGTAAGTTTTGGGATATTGATGATGTCATGGGTGCTCTAAGAATAAGTTATTTTCGCTTGAAACCAGCATCAAGGCAATGCTTTTCATTTTGTGCCATCTATCCTGAAGATTTTCAAATCTCAAAGGAACAACTAATTCATCTTTGGATGGCCAATGGACTAATCAAGTCCAGAGGGAATTTGGAGGTTGAAGATGTAGCTGACGAAGTATGGGAGGAACTATGCCAGAGATCATTTTTTCAAGAAGTAAGGATTGATGTATATGGAAACACCACTTTCCAGATCCATGACTTATTCCTTGAACTTATCCAATCTGTAGTGGGAGAAGAGTGTAAAGTTTATGATAAGTCTGCAAGCTTGATTAATTTATCAAGAAGGGTCCACCATATAAGTTACTCTGGCTTTCTTGAGGAGTTAAATCAAAGTACATTCAAGAATGTTGAGTCTTTGAGGACTTTTATTAATCTTGATCAGCCAAAGGGAAATTTCCTTACCACTCAGACATTGATTTTACATGATATGCCAATCTGCAATTCTCTCCGAGCATTGCATACAAGATCTTCTCAACTCTCAACACTGAAGAGTTTAACAAATTTGAGGTACTTGAATATTTATGATAGCTATATCACAACGTTGCCAAAATGTGTTTCCAGGCTGCAGAAACTGCAAATACTAAAGCTAGAACATTGTCGCTATCTCACTTGTTTGCCCAAACACTTGACAAAGTTGAAGGATCTCACACATCTCATAATTGAAAGATGTTGGTCATTAGTATCAATGCCTCCAAAAATGGGGGAGTTGAAACATCTAAAAACACTGAATACTTTTATTGCGGATTCAAAATCCAGACATTGCTTAGCAGAGTTACATGATTTACAGCTTGGAGGAAGACTACACATTAAAGGCCTCAAGAATGTCCAAAGTGAACGTGATGCTAAAGCATTTTAG 2088 0.4085 MATDALLGILIGNLNTFVQNEIAALSGVDSQIQDLSENLSAIRALFQDAAEEQFTSHGMKDWLNKLSDAMHVLEDILEECSMESNRLQSGGWLARFHPKTILFHHAISKRIKDMVKRFQRIEEERRRFQLPVRVTQRQQEDDDQRQTISSIPEHPMYGRVKDKEKIVDFLTKHACCNDGVSVYPVVGMGGLGKTTLCRWVFNHDKVIQHFDLRIWVCVSTNFNMMRILEYILESTTGQNPNLSTLEAMQNKVQQVLLGKRYLLVLDDVWDNVKWEDLKSVLNCRGSGIKGVSVLVTTRDPSVASVMTPCNSHHLQPLTENDNWSLFTHYAFGLNNQQPAKLVEIGKEIVRRCVGNPLASKVLGSLLRNKKEEKHWLNVLESKFWDIDDVMGALRISYFRLKPASRQCFSFCAIYPEDFQISKEQLIHLWMANGLIKSRGNLEVEDVADEVWEELCQRSFFQEVRIDVYGNTTFQIHDLFLELIQSVVGEECKVYDKSASLINLSRRVHHISYSGFLEELNQSTFKNVESLRTFINLDQPKGNFLTTQTLILHDMPICNSLRALHTRSSQLSTLKSLTNLRYLNIYDSYITTLPKCVSRLQKLQILKLEHCRYLTCLPKHLTKLKDLTHLIIERCWSLVSMPPKMGELKHLKTLNTFIADSKSRHCLAELHDLQLGGRLHIKGLKNVQSERDAKAF* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0188 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 411 IPR027417 -
Ahy5g0188 695 Pfam NB-ARC domain 161 380 IPR002182 GO:0043531
Ahy5g0188 695 Gene3D - 136 311 IPR027417 -
Ahy5g0188 695 Coils Coil 32 52 - -
Ahy5g0188 695 Gene3D - 316 401 IPR042197 -
Ahy5g0188 695 Pfam Rx N-terminal domain 7 96 IPR041118 -
Ahy5g0188 695 Gene3D - 403 485 IPR036388 -
Ahy5g0188 695 Gene3D - 7 126 - -
Ahy5g0188 695 Gene3D Ribonuclease Inhibitor 497 689 IPR032675 -
Ahy5g0188 695 PRINTS Disease resistance protein signature 182 197 - -
Ahy5g0188 695 PRINTS Disease resistance protein signature 255 269 - -
Ahy5g0188 695 PRINTS Disease resistance protein signature 352 366 - -
Ahy5g0188 695 PRINTS Disease resistance protein signature 597 613 - -
Ahy5g0188 695 PANTHER OS10G0130600 PROTEIN 39 663 - -
Ahy5g0188 695 PANTHER DISEASE RESISTANCE PROTEIN RP 39 663 IPR044974 GO:0006952
Ahy5g0188 695 CDD RX-CC_like 4 123 IPR038005 -
Ahy5g0188 695 SUPERFAMILY L domain-like 475 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0188 Ahy-Chr5 2191538 2193883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0188 187 654 WRKY Transcription Factor Family AT5G45050 22.780 2.62e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0188 - - ahf:112747513 1365.13