Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0178 ATGATCGGCACAGGGTACGTGATGCTAGTTTCTTCTGATACAGGTGCTGCATCTTTAGTGCACTTGTACAAGTACAAGTTAATTAAGGAAGTTGGTGATGGAACGTTTGGGAGTGTTTGGAGAGCTATTAATAAGCAAACTGGAGAAGTTGTTGCAATTAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGGGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCACCAGCGTGGATACTTCCACCGTGATCTGAAGCCTGAGAACTTGCTGGTTACCAAGGATATCATAAAAATTGCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGAGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCTCTCTTCGTCCTCTTTTCCCTGGTGCCAGTGAAGCGGATGAGATCTACAAAATATGCGGTGTGATAGGCAGCCCAACCATTGAATCATGGGCTGATGGGCTGAAACTTGCAAGGGATATAAACTATCAGTTCCCACAGCTTGCTGGTGTACATCTTTCGGCACTGATACCATCTGCGAGTGATGATGCGGTCAGCCTTATCAGGTCACTTTGCTCATGGGATCCCTGCAAGAGGCCAACAGCTGCAGAGGCCCTTCAACATCCCTTTTTCCAGACTTGTTTTTATGTTCCTCCATCCCTTCGTACTAGAGCAGTGTCAAGAACTCCTCCATCTGCTGGAACAAGGGGAGCCCTTGATCAGCAAGGGGTTAGGAGATATTCTGGCATGTTGCCTAATTCAAAGCTCACCAATAACTTCTCCTCTCCGAAATTACATCCTCCTTTAGCTTCAGGTGTGCAACGTAAGCTGGATATGGTGAATCAGAATGGAAGTAAGAATGAGAAGTCCATGAATACTGTTAAACAATCAAAATATCGACAGCCTGGAAAGGATAGCCCAACTGCTATGAACAAGGGGAGGAATGCGAAGGCAATTTCTGAAACAGCGGATAGGTTGACCAATATGAATGTTGGTAGTGGTACTCGAAGAGGACAACCCCGCCCTCCTCCAATGAAGGCTGGAGTTAATTGGATTTCTGAATCTGGAAACTTCATGCTGAGAGCTGCACAGCCGATCCCCACCGGAAGAACTTTCAGTCGGAAGGTTGCTGGATGA 1416 0.4463 MIGTGYVMLVSSDTGAASLVHLYKYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKMFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGSPTIESWADGLKLARDINYQFPQLAGVHLSALIPSASDDAVSLIRSLCSWDPCKRPTAAEALQHPFFQTCFYVPPSLRTRAVSRTPPSAGTRGALDQQGVRRYSGMLPNSKLTNNFSSPKLHPPLASGVQRKLDMVNQNGSKNEKSMNTVKQSKYRQPGKDSPTAMNKGRNAKAISETADRLTNMNVGSGTRRGQPRPPPMKAGVNWISESGNFMLRAAQPIPTGRTFSRKVAG* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0178 471 SMART serkin_6 25 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0178 471 SUPERFAMILY Protein kinase-like (PK-like) 21 308 IPR011009 -
Ahy5g0178 471 Gene3D Phosphorylase Kinase; domain 1 16 103 - -
Ahy5g0178 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Ahy5g0178 471 MobiDBLite consensus disorder prediction 375 407 - -
Ahy5g0178 471 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 23 424 - -
Ahy5g0178 471 MobiDBLite consensus disorder prediction 375 397 - -
Ahy5g0178 471 ProSiteProfiles Protein kinase domain profile. 25 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0178 471 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Ahy5g0178 471 CDD STKc_MAK_like 25 304 - -
Ahy5g0178 471 Gene3D Transferase(Phosphotransferase) domain 1 104 309 - -
Ahy5g0178 471 Pfam Protein kinase domain 25 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0178 471 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 23 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0178 Ahy-Chr5 2075183 2082137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0178 24 305 Core Cell Cycle Gene Families AT3G48750 38.621 5.13e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Ahy5g0178 Pkinase 4.60E-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0178 K08829 - gmx:100810150 813.142