Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0163 ATGGGAAGTAGTTATGGTGGCGGAATTGGAGGAGGGGAAGGTGGTTATGGGGTGGTGATGAGTATGACGAGAGAGCCCAAGCCTAGGTTGAGGTGGACAACCGATCTTCATGATCGCTTTGTGGATGCCGTCACCAAACTTGGTGGCCCGGACAAAGCAACTCCCAAATCTGTTCTGAGGATAATGGGTTTGAAAGGCTTGACATTGTATCATTTGAAGAGCCACTTACAGAAATATAGACTTGGACAACAAGCTAAAAAACAAAATGAAGAACATCACAAAGAGAACAGTAGATATTCATATGTGAATTTCAGCAATAGCTCTTCAGAATTTAGCAGTAGTTTCAGAGGTGATAATGAAAGGGGAGAAATCCCAATAGCAGAGGCATTGAGACATCAAATTGAAGTCCAAAAGAGGTTGGAAGAACAGCTAGAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCTGTGTTAGAGAAAGCTCAGAGGACACTTTCCATGGAAGGTTCAGGCAATAATCTAGAAGCATCAAGAGCTCAATTGACCGAATTCAACTCTGCCTTGTCCAATTTCATGGAAAACATGAACAACAAAGATAGCAAACAAAGCATATTAGACATGAATGATTTTTATAGTAAAGTCCATGGTTCAGGTTTCCATAATTACCATGAAGTAATAAGGAGAGAAAAAAATATTGATCAAAAGCCTAAAATTGAAGAGGGTTCAATTCAGTTTGACTTAAACAGCAAAAGTAGTTATGATCTTGTATCTGCAAGTGGTGATGGATCTGAAATTGAAGCCAAAATACTTTCATATAGGCTATGA 846 0.3936 MGSSYGGGIGGGEGGYGVVMSMTREPKPRLRWTTDLHDRFVDAVTKLGGPDKATPKSVLRIMGLKGLTLYHLKSHLQKYRLGQQAKKQNEEHHKENSRYSYVNFSNSSSEFSSSFRGDNERGEIPIAEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSMEGSGNNLEASRAQLTEFNSALSNFMENMNNKDSKQSILDMNDFYSKVHGSGFHNYHEVIRREKNIDQKPKIEEGSIQFDLNSKSSYDLVSASGDGSEIEAKILSYRL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0163 281 SUPERFAMILY Homeodomain-like 26 84 IPR009057 -
Ahy5g0163 281 Pfam MYB-CC type transfactor, LHEQLE motif 125 171 IPR025756 -
Ahy5g0163 281 Gene3D - 26 84 - -
Ahy5g0163 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 266 IPR044848 GO:0003700
Ahy5g0163 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 266 - -
Ahy5g0163 281 Pfam Myb-like DNA-binding domain 30 80 IPR001005 -
Ahy5g0163 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 84 IPR017930 -
Ahy5g0163 281 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 27 82 IPR006447 GO:0003677
Ahy5g0163 281 Coils Coil 127 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0163 Ahy-Chr5 1957772 1961900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0163 1 197 G2-like Transcription Factor Family AT3G24120 50.746 5.27e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy5g0163 Myb_DNA-binding 6.40E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0163 - - adu:107487134 488.034