Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0139 ATGGGCAGCAGTGAGATGGATAAAACACCAAAAGAGAAGGAGTCAAAGACTCCTCCACCTGCTTCACAGGAGCAATCTTCAGCCACCAGTACCGGAGCCGTTAATCCCGAATGGTCCAGTTTTCAGGCATATTCTCCTATACCTCCACATGGGTTTATGGCATCAAGTCCCCAAGCCGCCCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTACGGCACTCCAACACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGCCCTTTTCCCATGCCTTCTCCAAACGGTATTGCTGAGGCTTCAGGAAATACTCCTGGCAGCATGGAAGCTGATGGAAAGCCTCCTGAGGTGAAGGAAAAACTGCCAATCAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAACATGATTACAGGGAAAAATAATGAGCCCGGTAAAACAGGGACTTCTGCTAATGGAATTCATTCAAAGAGTGGTGAGAGTGCAAGTGAAGGTAGCAGTGAAGGAAGTGATGCTAATTCTCAGAATGAATCTCAATTGAAATCAGGGGGAAGACAGGATTCTTATGAAGATGAACCATCTCAAAATGGCAGTTCGGCGCATGCTCCTCAAAATGGGGGGATTAATACACCTCATGCGGTTGTTAATCAAACCATGTCTGTCATACCTATCACTGCAGCCGGTGTTCCTGGAGCTGTTCCTGGTCCCACAACAAACTTGAATATAGGAATGGATTATTGGGGCACACCGACAGCATCCAACATTCCTGCTCTTCGTGGAAAGGTTCCGTCTACTGCAGTTGCTGGAGGGATGGTTGCTGCTGGATCACGAGATAGTGTTCAGTCACAACTTTGGCTACAGGACGAAAGAGAGCTTAAAAGACAAAGGAGGAAGCAGTCTAACAGGGAATCTGCTCGAAGATCCAGATTGCGCAAGCAGGCTGAGTGTGATGAGCTAGCTCAGCGTGCTGAGGCTTTGAAAGAAGAAAATGCTTCTCTGCGGTCAGAAGTTAGTCGGATCAGAAGTGAGTATGAGCAGCTAGCCTCTGAGAATGCAGCTCTCAAGGAGAGACTTGGCGAACTACCTGGGACTGATGATCTTAGGTCCAGAACAATGAATGATCAGCCTGCGGCTGATGACCCTCAACAGAGCGGACAGGCAGAGGCCGTGGAGGGTGGCAATTAG 1230 0.4821 MGSSEMDKTPKEKESKTPPPASQEQSSATSTGAVNPEWSSFQAYSPIPPHGFMASSPQAAPYMWGVQHIMPPYGTPTHPYVAMYPHGGIYAHPSMPPGSYPFSPFPMPSPNGIAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEPGKTGTSANGIHSKSGESASEGSSEGSDANSQNESQLKSGGRQDSYEDEPSQNGSSAHAPQNGGINTPHAVVNQTMSVIPITAAGVPGAVPGPTTNLNIGMDYWGTPTASNIPALRGKVPSTAVAGGMVAAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEQLASENAALKERLGELPGTDDLRSRTMNDQPAADDPQQSGQAEAVEGGN* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0139 409 CDD bZIP_plant_GBF1 309 359 IPR045314 GO:0003700|GO:0006355
Ahy5g0139 409 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 311 326 IPR004827 GO:0003700|GO:0006355
Ahy5g0139 409 Coils Coil 324 372 - -
Ahy5g0139 409 MobiDBLite consensus disorder prediction 366 409 - -
Ahy5g0139 409 MobiDBLite consensus disorder prediction 383 397 - -
Ahy5g0139 409 Pfam bZIP transcription factor 304 366 IPR004827 GO:0003700|GO:0006355
Ahy5g0139 409 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Ahy5g0139 409 MobiDBLite consensus disorder prediction 1 18 - -
Ahy5g0139 409 MobiDBLite consensus disorder prediction 111 226 - -
Ahy5g0139 409 Pfam Disordered region downstream of MFMR 135 271 - -
Ahy5g0139 409 MobiDBLite consensus disorder prediction 1 41 - -
Ahy5g0139 409 MobiDBLite consensus disorder prediction 146 226 - -
Ahy5g0139 409 MobiDBLite consensus disorder prediction 306 329 - -
Ahy5g0139 409 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 407 IPR044827 GO:0003700|GO:0006355|GO:0043565
Ahy5g0139 409 SMART brlzneu 304 368 IPR004827 GO:0003700|GO:0006355
Ahy5g0139 409 SUPERFAMILY Leucine zipper domain 307 363 IPR046347 GO:0003700|GO:0006355
Ahy5g0139 409 Gene3D - 307 361 - -
Ahy5g0139 409 MobiDBLite consensus disorder prediction 19 41 - -
Ahy5g0139 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 306 369 IPR004827 GO:0003700|GO:0006355
Ahy5g0139 409 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0139 Ahy-Chr5 1657363 1663040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0139 1 403 bZIP Transcription Factor Family AT2G35530 63.990 3.86e-170 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy5g0139 MFMR_assoc 4.10E-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0139 K09060 - gmx:100101882 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0139 5 1657363 1663040 Ahy1g0933 1 14107735 14113433 PCT
Ahy1g0933 1 14107735 14113433 Ahy5g0139 5 1657363 1663040 PCT