Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0123 ATGGAGTTGTTTCCAGCACAACCAGACTTGTCCTTGCAAATCAGCCCTCCAACAGGCAACGGCACCGCCAAACAACAAGAAGTTGATTTGGGGTTCTGGAAGAGAGCCTTGGACTCTTCTAGAACCTCCTTCTCTTCTTCTTCTTCTCCTTCTCCTTCTTCCCTCCCCAAACCCACATCATACTTCGACCTCTCCCTCTCCAATCCAAGGCCTTCTCCCTCATCACACTACTTCAATAACACCGCCACCACCACCCCCACGAATAATCATAATCTCTTATTTCAATCGCTGCAGTACTACCACCACCACCACCATCCACTGTTACAGCCGCAGCCACAGTCGCAGCCGCACACCCTCAGCCAGGAGCTCGGCTTTCTCAGACCAATTAGAGGGATCCCGGTGTACCAGAACCCACCTTCTTTGCCATTCCCGCAGCACCACCATCACCACCATCATCTTCTAGAACCTTCGTCTCCTCCCACCACCGCCAACGCCGGCGCTTCCACTCATCACTTTCAGTCCCAGGCTTTGATGCGGTCGAGATTCTTGTCGCGATTCCCCGCCAAACGGAGCATGAGAGCTCCAAGGATGCGCTGGACTACCACTCTCCATGCTCGCTTTGTTCATGCCGTTGAACTCTTAGGTGGCCATGAAAGGGCTACACCAAAATCAGTTCTTGAACTAATGGATGTCAAGGATCTCACTCTAGCACATGTTAAGTCACATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCGGCTTCTTCAGGGCAATCTGATGTATATGATAATAGATCATCGGGTGATACATCTGAAGACATAATGTTTGACATAAACTCACCATCAACAAGGAGGTCTGATCTATCCGTTAAGCAGGGAAGAACAGATAATAATAACAATAACAATCATCTTAATCAAGATAAAGAATATCGTGGCCTTTGGAGTAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAAAGCTTGATTCTGTTGGGAACAACGTGCATTCCCTTGAGAAGGAAATGGATCCAAAGTGTGTAAGCTATGAGAGAATATCAGATGGAAGCTCATCTTCAAACGTGTCAGCATCAACAAGCCCCAAGAAACCTAATTTGGATTTGGAATTCACATTGGGACAACCACTTTGA 1161 0.478 MELFPAQPDLSLQISPPTGNGTAKQQEVDLGFWKRALDSSRTSFSSSSSPSPSSLPKPTSYFDLSLSNPRPSPSSHYFNNTATTTPTNNHNLLFQSLQYYHHHHHPLLQPQPQSQPHTLSQELGFLRPIRGIPVYQNPPSLPFPQHHHHHHHLLEPSSPPTTANAGASTHHFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNRSSGDTSEDIMFDINSPSTRRSDLSVKQGRTDNNNNNNHLNQDKEYRGLWSNSSREAWLHGKPKLDSVGNNVHSLEKEMDPKCVSYERISDGSSSSNVSASTSPKKPNLDLEFTLGQPL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0123 386 MobiDBLite consensus disorder prediction 253 311 - -
Ahy5g0123 386 MobiDBLite consensus disorder prediction 157 171 - -
Ahy5g0123 386 MobiDBLite consensus disorder prediction 38 88 - -
Ahy5g0123 386 Gene3D - 194 251 - -
Ahy5g0123 386 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 195 248 IPR006447 GO:0003677
Ahy5g0123 386 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 385 IPR044847 GO:0000976|GO:0006355|GO:0010158
Ahy5g0123 386 SUPERFAMILY Homeodomain-like 192 248 IPR009057 -
Ahy5g0123 386 MobiDBLite consensus disorder prediction 1 88 - -
Ahy5g0123 386 MobiDBLite consensus disorder prediction 11 25 - -
Ahy5g0123 386 Pfam Myb-like DNA-binding domain 196 247 IPR001005 -
Ahy5g0123 386 MobiDBLite consensus disorder prediction 355 375 - -
Ahy5g0123 386 MobiDBLite consensus disorder prediction 354 386 - -
Ahy5g0123 386 MobiDBLite consensus disorder prediction 139 171 - -
Ahy5g0123 386 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0123 Ahy-Chr5 1463472 1468920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0123 78 385 G2-like Transcription Factor Family AT4G17695 39.144 2.36e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy5g0123 Myb_DNA-binding 1.90E-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0123 - - aprc:113868756 451.825