Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0121 ATGAGAATGTCCCGTTTGCCTCCACTGAAGAAACTTTTTCTCCTCAACATAAAAAGAAAGAAAGAAGAAGCAGCAAGAATGTATGGGGATTGCCAAGTAATGTCTACAATGGGAGGCAACGTAGTTGTAAACTCATCAGAAACACTTTTCTCTTCTCCGATCCAAAACAACAGCTTCACCTTCATGCCTACCATGCATTTTCATCACTCTTTTCCCACCATGAAGGAAGAAGACGGGATCTTGAGAGGGAAGGAAGAGATCATGGAGAGCGGTTCAGGGAGCGAACAAGTTGAAGACAAGTCAGGGAATGAGCAAGAGACTGATCAACAACAGCCTCAGAATAAGAAGAAACGTTACCACAGGCACACTGCACGCCAGATCCATGAGATGGAAGCTTTGTTCAAGGAATGTCAACACCCGGATGATAAGCAACGGCTGAAACTTAGCCATGAACTCGGCCTTAAACCGCGCCAGGTTAAGTTCTGGTTCCAGAACCGCCGAACGCAGATGAAGGCACAACAAGATCGAGCTGAAAATGTGATTCTAAGAGCGGAGAATGAGACTCTAAAGAATGAGAATTATCGTCTACAAGCATCACTGCGTAGTGTTATATGTCCCAATTGTGGTGGTCCAGGAATAATGGGAGCTGATCTTGGCTTGGATGAACAACAACTTCGCATTGAAAATGCCAGGTTAAGAGAGGAGTTGGAACGTGTGTGCTGCCTGACATCAAGATACAGCGGGCGTCCAATCCAAACAATGGCACCAGCACCAGCACTGATGGCCCCATCACTGGACTTGGACATGAACATCTACCCAAGGCACTACGTTGATCCCACCATTCCCCCGTGCACCGAGATGATTCCTGTTCCAATGCTTCCCCCGGAAGCTTCTCAGTTCCCGGAGGGCGGTCTCTTAATGGAAGAGGAGAAGTCTCTGGCCATGGACCTTGCCGCCTCTTCCATGGCCGAGCTTGTCAAGATGTGCCATGCTAACGAGCCGCTTTGGATCCGTGGCTGCGACGGCGATAGGGAAGTTCTTAACTTTGAGGAGCACGGCAGGCTGTTCCCGTGGCCGTTGAATCTCAAGCACCGGACTGAAGCTAGCCGTGACACCGCTGTTGTCATCATGAATAGTGTCACTCTTGTTGATGCCTTCCTCGATGCTAACAAGTGGATGGAACTGTTTCCCACAATTGTTTCTAGAGCAAAAACGGTGCAAATAATATCTTCAAATGCTTCTGGCCATGCAAGCGGGTCTCTGCAGCTGATGTATGCGGAATTCCAAGTTCTTTCTCCATTGGTATCGACTCGTGAGACTCATTTCCTTCGGTACTGTCAACATAACGCTGAGGAGGGAACGTGGGGCATTGTTGACTTCCCAATCGATAGCTTTCAGCAGAACCTGCACCCTTCTTATCCCAGATACTGCAGGCGACCCTCTGGCTGTCTCATTCAAGATATGCCAAATGGATATTCAAGGGTAACATGGATTGAGCATGCAGAAGTAGAAGAGAAACCCGTGCATCAGATATTCAGCAACTATGTTTACAGTGGTATGGCTTTTGGTGCACAGCGGTGGTTGGGTGTTTTGCAGAGACAATGTGAGAGGGTTGCAAGCCTCATGGCCAGAAACATTTCAGATCTTGGAGTGATACACTCACCAGAAGCTAGAAAGAACTTGATGAAACTTGCACAGAGGATGATACGAACGTTCAGCCTCAACATGAGCACGTCAAGTGGTCAATCATGGACTGCAATATCAGATTCCCCTGAAGATACCGTTAGAATCACCACCAGGAAGATCACAGAGCCTGGTCAACCCAACGGTGTCATTCTGGGTGCTGTTTCAACCACTTGGCTTCCCTATTCCCACACCAAGGTCTTCGATCTGTTACGCGATGAACGCCACAGATCTCAGATGGATGCTCTTTCCAATGGGAATTCACTCAATGAAGTTGCTCACATTGCAAATGGTTCCCATCCAGGAAACTGCATTTCCCTTCTCCGCATCAATGTTGCGAGCAACTCATCGCAGAACGTGGAGCTAATGCTGCAAGAGAGCTGTACGGACCAATCAGGGAGTGTGGTGGTGTACACTACCATTGCTGTGGACTCCATTCAGGTAGCCATGAGCGGAGAGGATCCTTCATGCATTGCGCTTCTCCCACAAGGCTTCATTATAACGCCAATGCCGCCATCAAGCAACAACTCATCCTCTTCTGAAGCTCTTATCAATGAACATGGCTGCCTCCTCACCGTTGGCCTCCAGATTCTAGCTAGCACCATTCCCTCCGCCAAGCTCAACCTGTCCAGCGTCACCTCCATCACCAACCACCTCTGCAGCACCGTGCACCAGATCGAAGCCTCTCTTTGCAACACCGCCAACAATGAGCCAACCACCACCACTGCACCTCCCAAAACAGTGAACTAA 2433 0.4887 MRMSRLPPLKKLFLLNIKRKKEEAARMYGDCQVMSTMGGNVVVNSSETLFSSPIQNNSFTFMPTMHFHHSFPTMKEEDGILRGKEEIMESGSGSEQVEDKSGNEQETDQQQPQNKKKRYHRHTARQIHEMEALFKECQHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRAENVILRAENETLKNENYRLQASLRSVICPNCGGPGIMGADLGLDEQQLRIENARLREELERVCCLTSRYSGRPIQTMAPAPALMAPSLDLDMNIYPRHYVDPTIPPCTEMIPVPMLPPEASQFPEGGLLMEEEKSLAMDLAASSMAELVKMCHANEPLWIRGCDGDREVLNFEEHGRLFPWPLNLKHRTEASRDTAVVIMNSVTLVDAFLDANKWMELFPTIVSRAKTVQIISSNASGHASGSLQLMYAEFQVLSPLVSTRETHFLRYCQHNAEEGTWGIVDFPIDSFQQNLHPSYPRYCRRPSGCLIQDMPNGYSRVTWIEHAEVEEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIHSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTAISDSPEDTVRITTRKITEPGQPNGVILGAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSVVVYTTIAVDSIQVAMSGEDPSCIALLPQGFIITPMPPSSNNSSSSEALINEHGCLLTVGLQILASTIPSAKLNLSSVTSITNHLCSTVHQIEASLCNTANNEPTTTTAPPKTVN* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0121 810 PANTHER - 103 797 - -
Ahy5g0121 810 MobiDBLite consensus disorder prediction 88 114 - -
Ahy5g0121 810 Pfam Homeodomain 116 171 IPR001356 GO:0003677
Ahy5g0121 810 SUPERFAMILY Bet v1-like 308 539 - -
Ahy5g0121 810 Gene3D - 364 526 IPR023393 -
Ahy5g0121 810 SUPERFAMILY Homeodomain-like 103 174 IPR009057 -
Ahy5g0121 810 ProSiteProfiles 'Homeobox' domain profile. 113 173 IPR001356 GO:0003677
Ahy5g0121 810 Pfam START domain 317 537 IPR002913 GO:0008289
Ahy5g0121 810 MobiDBLite consensus disorder prediction 88 122 - -
Ahy5g0121 810 Coils Coil 167 192 - -
Ahy5g0121 810 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 103 797 IPR042160 -
Ahy5g0121 810 CDD START_ArGLABRA2_like 311 536 - -
Ahy5g0121 810 SMART START_1 316 537 IPR002913 GO:0008289
Ahy5g0121 810 SMART HOX_1 114 177 IPR001356 GO:0003677
Ahy5g0121 810 Gene3D - 100 185 - -
Ahy5g0121 810 CDD homeodomain 116 174 IPR001356 GO:0003677
Ahy5g0121 810 SUPERFAMILY Bet v1-like 555 788 - -
Ahy5g0121 810 ProSiteProfiles START domain profile. 307 540 IPR002913 GO:0008289
Ahy5g0121 810 ProSitePatterns 'Homeobox' domain signature. 148 171 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0121 Ahy-Chr5 1406372 1411898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0121 54 794 Homeobox Transcription Factor Family AT5G46880 58.595 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy5g0121 START 1.40E-39 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0121 - - gmx:100812829 1283.09