Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0113 ATGAGTGGAGTGAGTACCAGCGGTGGAGACGATGGCGGTGGCATGCTCGTGCCGGCGCCGGCACCGATGCCGATGCCGATGCCGAGCACGAACACGCCGCCGCCGTTCCTGAGCAAGACGTACGACATGGTAGAGGACCCTTCAACGGACCCGATCGTGTCGTGGAGCGCAACGAACAATAGCTTCGTGGTTTGGAACCCACCGGAATTCGCAAGGGACCTTTTGCCGAAATACTTCAAGCACAACAACTTCTCCAGCTTCGTTAGGCAGTTGAACACTTACGGTTTCAGGAAGGTTGATCCAGATCGCTGGGAATTTGCAAATGAAGGATTTTTGAGGGGTCAAAAGCACTTACTTAGAACTATAACTCGGCGGAAACCTGCCCATGGTCATAGTCATCAACAGGCTCCACAATCACATGGACAGAGTTCAACAGTAGGGGCATGTGTAGAAGTTGGGAAGTTTGGGATTGAGGAAGAGGTTGAGAGACTTAAAAGAGATAAGAACGTCCTCATGCAAGAGCTTGTGAGGTTGCGACAGCAGCAACAGGCCACCGATAGCAAGATGCAGACAATGGCTCAGCGCCTTCATGGAATGGAGCAACGACAACAACAAATGATGTCATTTCTGGCAAAAGCTGTTCAAAGCCCAGGATTCTTTGCTCAGTTTGTGCAACACCAAAGTGAGAACAATAGACGCATAACTGAAGTCAATAAAAAGCGTCGGCTCAGGCCGGAAGGCATTTCCGAAACTGAGCCTGCTACTGTTCCTGCTGGACAAATTGTGAAATATCAGCCTATGATGAATGACCTAGCAAAATCAATGCTAAAGCAAATTATCAAATGGGATGCTTCTCATGTCGATGCTCTAAGTAAAAACTCAGATAATTACTTGATTGCCGATGACACCATGACTTCAACCTGGCCTTCTGGTTCTGGGGTAACACTTCAAGAGGTTCCTCCGGCTTCATTGCAGTCCTCCCACACTCCTGCTGCTACAGGGACTCAAGGACACATCCCATCAGCAGCCATACCTGATATTCTGTCTTTACCACAAGTTGCAGCTCCTGAAAAAGTTACAAAGGATGGATCATCTGGGGCACCTTCTATCCATGCTTCTCAAGCAGATGTTATCATGCCTGGTCTTCCTTCGATAAATGAGACAGAGACAAGAAGTAATATTCAAATGCCAGAGAAAGGGGACGAGGGATATATGGATCCTAATTCACTAGGAGTTGGTGCGTCATTTCCTATTGATATAGAAGGTTTTTCCCCTGAAATAGACATCGATGATTTCTTATCGAATCCTTCTATCTGGGATGATCTCTTGCAAACTCCAGTGCCCGTGGATATTGAGGAAGATGTTGCCAAAGAGTCCAAGGGTAATGGGGTGGAAACAACAGAAAATGGATGGGACAAAACTCAACGCATGGATCACCTTACTGAGCAGATGGGTCTTCTTTCTTCGGATGTACAAAAGAGAGTTTGA 1488 0.4718 MSGVSTSGGDDGGGMLVPAPAPMPMPMPSTNTPPPFLSKTYDMVEDPSTDPIVSWSATNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLRTITRRKPAHGHSHQQAPQSHGQSSTVGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATDSKMQTMAQRLHGMEQRQQQMMSFLAKAVQSPGFFAQFVQHQSENNRRITEVNKKRRLRPEGISETEPATVPAGQIVKYQPMMNDLAKSMLKQIIKWDASHVDALSKNSDNYLIADDTMTSTWPSGSGVTLQEVPPASLQSSHTPAATGTQGHIPSAAIPDILSLPQVAAPEKVTKDGSSGAPSIHASQADVIMPGLPSINETETRSNIQMPEKGDEGYMDPNSLGVGASFPIDIEGFSPEIDIDDFLSNPSIWDDLLQTPVPVDIEEDVAKESKGNGVETTENGWDKTQRMDHLTEQMGLLSSDVQKRV* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0113 495 SUPERFAMILY "Winged helix" DNA-binding domain 32 125 IPR036390 -
Ahy5g0113 495 MobiDBLite consensus disorder prediction 125 145 - -
Ahy5g0113 495 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 20 480 - -
Ahy5g0113 495 MobiDBLite consensus disorder prediction 1 21 - -
Ahy5g0113 495 Pfam HSF-type DNA-binding 36 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g0113 495 Coils Coil 154 181 - -
Ahy5g0113 495 Gene3D - 29 126 IPR036388 -
Ahy5g0113 495 PRINTS Heat shock factor (HSF) domain signature 36 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g0113 495 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g0113 495 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g0113 495 MobiDBLite consensus disorder prediction 310 336 - -
Ahy5g0113 495 SMART hsfneu3 32 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g0113 495 ProSitePatterns HSF-type DNA-binding domain signature. 75 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g0113 495 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 480 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0113 Ahy-Chr5 1329998 1333534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0113 1 488 HSF AT1G32330 50.669 5.26e-157 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy5g0113 HSF_DNA-bind 5.30E-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0113 K09419 - gmx:100815121 697.582