Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0104 ATGGGAAGGTCACCATGCTGTGATGAGAGTAGCGGTAATGTAAAGAAAGGGCCATGGACACCAGAAGAGGATGAGAAGCTGATTGATTACATAAAGAAACACGGTCATGGAAGTTGGAGAACTCTTTCAAAGCGTGCTGGTCTCAACAGATGCGGTAAGAGCTGCCGACTCAGGTGGGCTAACTACCTTCGTCCCGATATCAAGAGAGGCAAATTCACCCCAGACGAGGAGAGGATCATCGTCAACCTTCATTCTCTTCTTGGAAACAAGTGGTCAAAGATTGCAAGCCATCTTCCGGGAAGAACTGATAATGAGATAAAGAATTTCTGGAACACTCACATAAGGAAGAAGCTTCTGCAGATGGGTATTGATCCAGACACACACAAGCCAAGGACTGATTTCAATCACCTCATCAATCTCACACACTTGCTTGCAGCAGCCATCTCCTCCAATTCAGGGAATCCTATGATGAATATGAACACTCCTACTTGGGGGAGAAACCCTAATATTGCTCTACAAGGAGATGTTACTTCTCAATTATCCCAACTACATCTGTTGCAAAATCTGTTGCAAATTATGAACAGCAACACATTTGTTAACATGGGGAGTAGTAACCCTAATTATAATCCTTCCTTCGATAATTCATATCTCAATGAATCAAACACACTCCAAGCTGTTGGATTGAAAAGTGAAGGACATGCAAACAACCCTGCCGCCCTATTCTCTCATCAACACGGTGGTGGTGCAGTTAATAACACGCAAGAGATTTCATCACAAGGAAATGAAGAAGAAAATCCATTGTTGCCAGCATTAGTAGCATCCTCTCCAGTAGTCAGTGATGGAACCTGCAGCAGCTTCAACCAGATGGAGAATAATAATAATAGTAGCTGTTGCAACACAGCTCCAACATCCACAACACAATCACCCAATAATTCCAGCACAATCTTTGATGATTTAGAGATGCTCCTTCAGGATGATCAAACATCTGATTCCTACTGGAAAGATATTCTAAACTTCACATCTACATATACATCTGCATCAACAAATTCATGGTAG 1056 0.4223 MGRSPCCDESSGNVKKGPWTPEEDEKLIDYIKKHGHGSWRTLSKRAGLNRCGKSCRLRWANYLRPDIKRGKFTPDEERIIVNLHSLLGNKWSKIASHLPGRTDNEIKNFWNTHIRKKLLQMGIDPDTHKPRTDFNHLINLTHLLAAAISSNSGNPMMNMNTPTWGRNPNIALQGDVTSQLSQLHLLQNLLQIMNSNTFVNMGSSNPNYNPSFDNSYLNESNTLQAVGLKSEGHANNPAALFSHQHGGGAVNNTQEISSQGNEEENPLLPALVASSPVVSDGTCSSFNQMENNNNSSCCNTAPTSTTQSPNNSSTIFDDLEMLLQDDQTSDSYWKDILNFTSTYTSASTNSW* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0104 351 MobiDBLite consensus disorder prediction 234 263 - -
Ahy5g0104 351 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Ahy5g0104 351 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 339 - -
Ahy5g0104 351 Gene3D - 71 118 - -
Ahy5g0104 351 PANTHER MYB TRANSCRIPTION FACTOR 1 339 - -
Ahy5g0104 351 CDD SANT 71 114 IPR001005 -
Ahy5g0104 351 CDD SANT 18 63 IPR001005 -
Ahy5g0104 351 Gene3D - 15 68 - -
Ahy5g0104 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Ahy5g0104 351 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Ahy5g0104 351 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Ahy5g0104 351 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Ahy5g0104 351 SMART sant 68 116 IPR001005 -
Ahy5g0104 351 SMART sant 15 65 IPR001005 -
Ahy5g0104 351 MobiDBLite consensus disorder prediction 246 263 - -
Ahy5g0104 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 63 IPR017930 -
Ahy5g0104 351 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0104 Ahy-Chr5 1184073 1186431 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0104 1 337 MYB Transcription Factor Family AT5G16770 46.218 4.38e-87 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy5g0104 Myb_DNA-binding 4.80E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0104 K09422 - gmx:100810159 367.851