Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0056 ATGGCTACAATTTTCTTTTATCCATCACCAACCTTTCTTTACCTTTTGCTCTCAACCTTCCTTGCATTAAACCTCTCAACTTATTCGATTGAATTCCAAATATCTACGTTTACCACTGGCGATCCAAGCATACTTTATAGAGGACAAGCCATACCTCGTGTTGGAACGATAGAATTGAACAATAACATTGATTACTTATTCCAAGTTGGATCAGCCATATACTTCAAAGATGTTCTACTTTGGGAATCAAGATCAGGAAAACAAGCTGATTTGAAAACACACTTCACCTTTGTTATTGACACTCAAGGCAATTCTCAATATGCTGCTGGCCTTGCATTCTTCCTTGCACCTTCTGGATTCCAAATACCACCAAACTCTGCCGGCGGCTTCCTAGGCCTATACAACACATCCACTGCCGACTCGCTGCGCAATCAGATTGTTCATGTTGAGTTTGACTCCTTCCCTAATCCGGAGTGGGATCCCAAATTGGAGCATGTGGGAATCAATGTTAATTCAATTTCTTCGGCAAACTACACTGCTTGGAATGCTAGCAAGCATAGTAATGACATTGCTGATGCATGGATCACATACAATTCAACAAGCAAGATTCTAAGTGTGTCATGGAAATACCAAACAACCTCTACCTCTCAAGAGAATACTACTCTTTCTCATCAAATTGATTTGATGAAGGTCTTGCCTCAATCGGTTACAATTGGATTTTCCGCGGCTACTAGTGAGTACACAGAACGACATGTTATTCAGTCTTGGGAGTTCAGTTCAAGTTTGGACGCCGCAGAGCCTGGTAAAGGAAAGAATTCGAACAAGACATGGAAGGTGGTGGTTGGATCAGTTGTTGCAGGAGCTGTTTTGATTGTGGCAGTTATTTCAACATATGTAATATTTAGAAGATGGAAGAAGAAAAAGAAAAATGATGCTCTAAGAGAGAGGATGAGCTCTATTGATGACTTGGAAAAAGGAGCTGGACCAAGAAGATTCTCTTATGAGGAGGTTGTTGTCGCCACCAATAACTTCTCCCCAAACAGGAAGTTAGGTCAAGGTGGATTTGGCGCGGTATATAGAGGCTACTTTGCTGATCTAGATTTGGTTGTTGCTGTTAAGAAGATATCAAGTGGATCAAGACAAGGGAAAAGAGAGTATGTAACTGAAGTCAAAGTCATTAGCAGGTTAAGGCATAGGAATCTTGTGCAACTCATAGGTTGGTGCCATGATCGAGGTGAGTTCCTTCTTGTTTATGAGTATATGCCAAATGGTAGCCTTGATTCCCATTTGTTTGGGAATAGGACTCCATTATCGTGGAGCTTGAGGCACAAGATAGCTCTTGGATTGGCCTCTGCTATTCTCTATCTTCATGAAGAGTGGGAACAATGTGTATTGCATAGAGATATCAAACCAAGCAATGTGATGTTGGATTCTAGTTTCAATGTCAAGCTTGGTGATTTCGGTTTGGCTAAGCTCATAGATCATGAATTAGGGTCTCAGACATCGGTTTTAGCCGGAACTATTGGCTATATGGCTCCAGAATATATAAGCAGTCGCAGAGCAAGTAAGGAGTCAGATGTGTATAGTTTTGGATTGGTAGCTTTAGAGATTGCCACCGGGAAAAGGGTGTTTGACCTTATAGAGGATGAAGATAGTCAAAAGGGGTTAGCGGAGTGGGTTTGGGATCATTATGGAAGAGAAGAGCTTCATATGGTTGTGGATGGGAGACTAGAAAAGGATTTTGATGAGAAAGAAGCCATGTATTTGATGATTGTTGGTTTATGGTGTTGTCATCCTGATAAGAATGGGAGACCATCAATAAGACAAGCAATTCAAGTGCTGAATTCAGAAGGTGCACTGCCACAACTTCCAACAAAGATGCCTGTTGCTATATACCATATTCCCACACCTTCTGTCAGCTCTGATGGTGCTTCCGTTAGTGTTAGCCTCCAATCAGGTCGGTGA 1965 0.4158 MATIFFYPSPTFLYLLLSTFLALNLSTYSIEFQISTFTTGDPSILYRGQAIPRVGTIELNNNIDYLFQVGSAIYFKDVLLWESRSGKQADLKTHFTFVIDTQGNSQYAAGLAFFLAPSGFQIPPNSAGGFLGLYNTSTADSLRNQIVHVEFDSFPNPEWDPKLEHVGINVNSISSANYTAWNASKHSNDIADAWITYNSTSKILSVSWKYQTTSTSQENTTLSHQIDLMKVLPQSVTIGFSAATSEYTERHVIQSWEFSSSLDAAEPGKGKNSNKTWKVVVGSVVAGAVLIVAVISTYVIFRRWKKKKKNDALRERMSSIDDLEKGAGPRRFSYEEVVVATNNFSPNRKLGQGGFGAVYRGYFADLDLVVAVKKISSGSRQGKREYVTEVKVISRLRHRNLVQLIGWCHDRGEFLLVYEYMPNGSLDSHLFGNRTPLSWSLRHKIALGLASAILYLHEEWEQCVLHRDIKPSNVMLDSSFNVKLGDFGLAKLIDHELGSQTSVLAGTIGYMAPEYISSRRASKESDVYSFGLVALEIATGKRVFDLIEDEDSQKGLAEWVWDHYGREELHMVVDGRLEKDFDEKEAMYLMIVGLWCCHPDKNGRPSIRQAIQVLNSEGALPQLPTKMPVAIYHIPTPSVSSDGASVSVSLQSGR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0056 654 Gene3D - 28 274 - -
Ahy5g0056 654 Gene3D Transferase(Phosphotransferase) domain 1 421 636 - -
Ahy5g0056 654 ProSitePatterns Protein kinases ATP-binding region signature. 350 374 IPR017441 GO:0005524
Ahy5g0056 654 CDD STKc_IRAK 350 615 - -
Ahy5g0056 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 264 IPR013320 -
Ahy5g0056 654 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Ahy5g0056 654 CDD lectin_legume_LecRK_Arcelin_ConA 30 262 IPR001220 GO:0030246
Ahy5g0056 654 PANTHER - 25 649 - -
Ahy5g0056 654 PANTHER PUTATIVE-RELATED 25 649 - -
Ahy5g0056 654 Pfam Protein kinase domain 346 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0056 654 ProSiteProfiles Protein kinase domain profile. 344 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0056 654 Pfam Legume lectin domain 30 269 IPR001220 GO:0030246
Ahy5g0056 654 SMART serkin_6 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0056 654 SUPERFAMILY Protein kinase-like (PK-like) 328 636 IPR011009 -
Ahy5g0056 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0056 Ahy-Chr5 591045 593028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0056 15 633 Receptor kinase-like Gene Family AT5G10530 56.230 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy5g0056 Pkinase 8.70E-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0056 - - jre:109014893 814.298