Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0050 ATGGCGTCACCAGAGACGGAGCATCCAAAGAAGGCTTTTGGATGGGCAGCTAGGGACCCTTCTGGGGTTTTATCCCCTTTCAACTTTTCCAGAAGGGAAACTGGAGAGCAAGATGTGGCATTCAAAGTGATGTACTGTGGAATATGTCACTCGGATCTTCACATGTTAAAGAACGAATGGGGCAATACCACTTTCCCTATAGTACCTGGGCATGAGATTGCTGGAGTAGTGACAGAGGTAGGAAGTAAGGCACAAAATTTCAAAGTTGGAGACAAAGTGGGAGTGGGAGTGTTGGTTGGATCCTGCAACTCATGCCAAGGCTGTGCTGCAAATCTTGAAAATTTCTGCCCGCAAATGATCCTAACATACAGTGCCAAGAACAAGGACGGCACCATCACCTACGGAGGCTACTCTGACTCAATGGTAGTCGATGAACGCTTCGCCATTCGCATCCCGGATAACCTTCCACTGGATGTGGCCGCTCCGTTGCTTTGTGCCGGGATCACGGTGTATAGCCCTCTCAGATATTTCGGACTTGACAAGCCTGGTTTGCACGTCGGTGTGGTTGGTCTTGGTGGATTAGGCCATGTGGCCGTTAAGTTTGCCAAAGCTTTTGGTGCTAAAGTAACTGTCATTAGTACTTCCCCTAACAAACAAAAGGAAGCTATTGAACGTTTAGGAGCCGATTCGTTTCTCTTAAGTAAAGACCAAGATAAGATGAAGGCTGCAATGTATAGCTTGGATGGTATTATTGACTCAGTTTCTGCAGTGCATCCTTTGGCTCCATTGCTGGCTCTATTGAAGCCTAATGGAAAACTTGTGATGGTTGGTTTACCTGAAAAGCCTCTAGAGTTGCCAATATTTTCTCTTTGTACGGGAAGAAAGATGATAGCTGGTAGTAGTATTGGAGGGTTGAAGGAGACACAAGAAATGATTGATTTTGCTGCTAAACATAACGTGAAGCCTGAGATAGAAGTTATTGCAATGGATTATGTAAACACAGCAATGGAGCGCCTCGCAAAAGCAGATGTCAAGTATCGATTTGTTATTGATATCGGAAACACTCTCAATGCCACAACCTCTTAA 1086 0.4521 MASPETEHPKKAFGWAARDPSGVLSPFNFSRRETGEQDVAFKVMYCGICHSDLHMLKNEWGNTTFPIVPGHEIAGVVTEVGSKAQNFKVGDKVGVGVLVGSCNSCQGCAANLENFCPQMILTYSAKNKDGTITYGGYSDSMVVDERFAIRIPDNLPLDVAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKQKEAIERLGADSFLLSKDQDKMKAAMYSLDGIIDSVSAVHPLAPLLALLKPNGKLVMVGLPEKPLELPIFSLCTGRKMIAGSSIGGLKETQEMIDFAAKHNVKPEIEVIAMDYVNTAMERLAKADVKYRFVIDIGNTLNATTS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0050 361 CDD CAD1 13 351 - -
Ahy5g0050 361 SUPERFAMILY GroES-like 18 183 IPR011032 -
Ahy5g0050 361 Gene3D - 166 322 - -
Ahy5g0050 361 Gene3D - 15 352 - -
Ahy5g0050 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 3 358 - -
Ahy5g0050 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Ahy5g0050 361 SMART PKS_ER_names_mod 22 350 IPR020843 GO:0016491
Ahy5g0050 361 Pfam Zinc-binding dehydrogenase 193 316 IPR013149 -
Ahy5g0050 361 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Ahy5g0050 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Ahy5g0050 361 PANTHER ALDEHYDE REDUCTASE 3 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0050 Ahy-Chr5 555354 557366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0050 10 356 Monolignol Biosynthesis Gene Families AT4G37990 70.605 1.25e-169 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0050 - K23232 gmx:100809071 555.829