Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0047 ATGGCAGCATCACAACATGAATCTGAGCATCCTAAGAAGGCTTTCGGATGGGCAGCAAGAGATTCTACTGGTTTTCTTTCCCCTTTTAACTTCTCAAGAAGGGAAACGGGTGAGAAAGATGTGACCTTGAAAATATTGTACTGTGGAATATGCCACACTGACCTTCACTTGTCCAGGAACGACTTCGGCGTTTCCATTTATCCATTAGTACCAGGGCATGAGATAGTTGGGGAAGTGACAGAGGTGGGAAGCAAGGTAGAAAAGTTCAAGATTGGGGACAAAGTGGGTGTTGGAACCATGGTTGACTCCTGCCGTTCATGCCAAAGCTGTGTTGACAACCTTGAGAGTTATTGTCCAAAAAAGATTCCCACCTATGGATTTAAGAATGTCGACGGCACCACCACATACGGAGGCTTTTCCGACACCATGGTAGCCCACGAGGACTTCGTGATTCGAATTCCCCACGGACTACCACTTGATGCAGCCGCCCCTCTGCTCTGTGCTGGGATTACAGTTTATAGCCCCCTCCGGTACTTCGGACTCGATAAGCCCGGTTTACATCTTGCTGTGGTTGGTCTTGGCGGCTTAGGCCACCTGGCTGTCAAGTTCGCCAAAGCCTTTGGCGCTAAGGTCACGGTTGTTAGTACATCGCCTCATAAAAAGAAGGAGGCGTTGGAAAATTTGGGAGCTGACTCCTTTGTCATAAGCACTGACCAAGATCAGATGCAGGGTGTTATTGGTACAATGGATGGTATTATTGACACGATTTCTGCAGATCATCCTTTGTTACATTTGCTTGGAATGTTGAAGTCTCATGGAAAGCTTGTATTGGTTGGTGCAGTAGCGAAGCTAGAGCTGCCAGTGTTTCCTTTAATCATGGGGAGAAAAATAGTAGCTGGTAGTAGCGTTGGAGGGTTAAAGGAGACTCAAGAAATGATTGACTTTGCGGCTGAGCATAATGTAAAAGCTGAGATTGAAGTCATTCCTGTTGACTATATCAACACAGCAATGGACCGTCTTTACAAAGCAGATGTGAAATATAGATTTGTCATTGATATCGGAAACACACTCAAGTCTAGCTCTTAA 1086 0.4576 MAASQHESEHPKKAFGWAARDSTGFLSPFNFSRRETGEKDVTLKILYCGICHTDLHLSRNDFGVSIYPLVPGHEIVGEVTEVGSKVEKFKIGDKVGVGTMVDSCRSCQSCVDNLESYCPKKIPTYGFKNVDGTTTYGGFSDTMVAHEDFVIRIPHGLPLDAAAPLLCAGITVYSPLRYFGLDKPGLHLAVVGLGGLGHLAVKFAKAFGAKVTVVSTSPHKKKEALENLGADSFVISTDQDQMQGVIGTMDGIIDTISADHPLLHLLGMLKSHGKLVLVGAVAKLELPVFPLIMGRKIVAGSSVGGLKETQEMIDFAAEHNVKAEIEVIPVDYINTAMDRLYKADVKYRFVIDIGNTLKSSS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0047 361 PANTHER ALDEHYDE REDUCTASE 4 360 - -
Ahy5g0047 361 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Ahy5g0047 361 Gene3D - 168 323 - -
Ahy5g0047 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Ahy5g0047 361 Pfam Zinc-binding dehydrogenase 195 317 IPR013149 -
Ahy5g0047 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 4 360 - -
Ahy5g0047 361 SUPERFAMILY GroES-like 21 185 IPR011032 -
Ahy5g0047 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 322 IPR036291 -
Ahy5g0047 361 Gene3D - 17 353 - -
Ahy5g0047 361 CDD CAD1 15 352 - -
Ahy5g0047 361 SMART PKS_ER_names_mod 18 351 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0047 Ahy-Chr5 521469 523443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0047 12 360 Monolignol Biosynthesis Gene Families AT4G37990 67.429 5.88e-163 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0047 - K23232 gmx:100816901 551.977