Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0033 ATGGATGAAATTCAGAGGGAAAAAGTCTATGTTGGTGTTGGAATTGATGTGCAAGATGGATTCAAGGTTTTGAATTGGGTTCTCAAGAATTGGAACAATAATAATTCTCATCCAATTTCTATTGTTATTCTCCATGTTGCTCACAACTTCTCCAATGATTATGTTTCTACACCATTTGGGAAACTTCCAGCAAGATCTGTGAATGAAGAGAAGCTTGAAGTTCTAAAGAAGTATGAAGAAGATAAAATCAAGAAGCTCTTTTCCAAGTATATTGCTTATTGTGATAAAGCCAAGGTGCCGGCAGAAATTCTTCAAGTTGAGAAAGTTGATGAACCTATCCAAAAGCGCATCCTAGATTTGATCTTTAGCCTTGGAATTACCAAATTGGTCATTGGCTTTTCATTCATGAAGCCCTCCTTGAAATCAAGAAGTGCCATAAGTGGATTGTTCTATGTTCACCAGCACAAACCATCATTCTGTGAATTGTTCATAGTTTGTGGTGGAGAACAAGTGTTCCTGAGATCAAAAAATGAAGAGAAAATCATGGAGGATGAAAATGGTGTCACGGTTGCAAGGTTAAAAGACAAGGCTGAAGAAGTTGAATCAAGAATAAAGGAAGAAGTGAGCGCAAGGGAAGAAATTAAGAAGGAAGTAGAGGAAGAAAAAGAACAAACGCAGGAGATTCGAATAGACGTAGAAGAGAGGAAGAGGAGGCTCAAGTCACTATCAGAGCTCCATTCCGAGCTCTCAAAGAGGGTGCACGTGTCCAAGATAGCCAAGTCACGTGCGGAGAGGCAGCTGGAGAAAGCGATTGCGGAGAGAGCGGAGATGGTGAGGGAGATAGAGGAGCTGAGGAGACAGAGGGACGTGCTCAACAGAAGGATCGAGTTCTGCAAACAGAAGGACGCAATTGGAATGGCCGCAAGGCTCATGAGCCAAGAGGAGGCGGCTGCGTGTGCTTTCAGGGAGTACTCCGAGGAGGAGCTGCGCCTGGCCACCGACAACTTTTCCGACAGATTGAGGTTCAAGTCCGGTGGAGATTGGAGCCATGTGTATAAAGGACGCATGCCTCATTCCACCGTTGCCATCAAGATGCTTGCTTCTTCTTTGTCCCTCCAAGATTTTCAATCTAAGGTGAGAATTCTTGGTGATATTAGGCAGCCTCATCTGATTGCTATGGTGGGCTTTTGCTCCGAGCCCAAATGCGTAGTATTCGAATACATGCACAACGGAAGCTTACGAGACATACTATTTTCTAGGAGAAGAAACCGGGCTTTAAAGTGGCATGATAGAATACGAATAGCTACAGAAGTTTGCTCGGGCCTAAGCTTTCTAAACTCAGTTAAACCAAGGCCCGCTATCCATTGTCACTTGACCCCATCCAACGTCCTCCTAGACCGGAACTATGTAGCCAAGATCACGGGCTTTGGGCTTGATGAGTGCAACGACGAGGAGTGTAACGTTGAGTCAGATATCCGGGCCTTGGGGGTGTTTTTGCTACACCTTTTAACAGGAAGAAATTGGGCCGGGCTTGTTGAGGAGGCGATGATAGTAGACACGGATAGAGAAGCATTTGTTGGGGTTCTTGATGAGACGGCCGGAGCATGGCCGTTGGATCTAGCTAAAGAGATAGCGGGCCTAGGGATGAGGTGCATGTCGAGGGGAGAGTTGAGTATTGGAGTGGTGATGGAGGAGCTGAGAGAGATTAGAAGAAAGGGTGATGAGATAGCAGCAAGAGAAGGGCGAAGAGTAATGAGGAGTGGAAGTGGTGCAGATAGAGATTGGTCAAGTGCTGTACCGAGTGTTTATCTTTGCCCTATACTTCAGGATGTAATGAAGAATCCACACGTGGCGGCAGATGGCTTTTCATACGAGCTTGAAGCAATACAACACTGGTTGCAAACGGGACATGACACGTCACCAATGACAAACTTAAGGCTTAAACACACATTCCTCACCCCTAATCACAGCCTTCGCTCCTTAATTGAAGATTGGCATACCAAGAATAACACATCATCTGCAGTTTTAAATTAG 2034 0.4513 MDEIQREKVYVGVGIDVQDGFKVLNWVLKNWNNNNSHPISIVILHVAHNFSNDYVSTPFGKLPARSVNEEKLEVLKKYEEDKIKKLFSKYIAYCDKAKVPAEILQVEKVDEPIQKRILDLIFSLGITKLVIGFSFMKPSLKSRSAISGLFYVHQHKPSFCELFIVCGGEQVFLRSKNEEKIMEDENGVTVARLKDKAEEVESRIKEEVSAREEIKKEVEEEKEQTQEIRIDVEERKRRLKSLSELHSELSKRVHVSKIAKSRAERQLEKAIAERAEMVREIEELRRQRDVLNRRIEFCKQKDAIGMAARLMSQEEAAACAFREYSEEELRLATDNFSDRLRFKSGGDWSHVYKGRMPHSTVAIKMLASSLSLQDFQSKVRILGDIRQPHLIAMVGFCSEPKCVVFEYMHNGSLRDILFSRRRNRALKWHDRIRIATEVCSGLSFLNSVKPRPAIHCHLTPSNVLLDRNYVAKITGFGLDECNDEECNVESDIRALGVFLLHLLTGRNWAGLVEEAMIVDTDREAFVGVLDETAGAWPLDLAKEIAGLGMRCMSRGELSIGVVMEELREIRRKGDEIAAREGRRVMRSGSGADRDWSSAVPSVYLCPILQDVMKNPHVAADGFSYELEAIQHWLQTGHDTSPMTNLRLKHTFLTPNHSLRSLIEDWHTKNNTSSAVLN* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0033 677 Coils Coil 190 252 - -
Ahy5g0033 677 Coils Coil 260 301 - -
Ahy5g0033 677 Gene3D Transferase(Phosphotransferase) domain 1 322 554 - -
Ahy5g0033 677 SUPERFAMILY RING/U-box 587 670 - -
Ahy5g0033 677 ProSiteProfiles Protein kinase domain profile. 337 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0033 677 Pfam Protein tyrosine and serine/threonine kinase 346 482 IPR001245 GO:0004672|GO:0006468
Ahy5g0033 677 CDD RING-Ubox_WDSUB1_like 603 644 - -
Ahy5g0033 677 SUPERFAMILY Protein kinase-like (PK-like) 321 553 IPR011009 -
Ahy5g0033 677 ProSiteProfiles U-box domain profile. 598 672 IPR003613 GO:0004842|GO:0016567
Ahy5g0033 677 Pfam U-box domain 599 670 IPR003613 GO:0004842|GO:0016567
Ahy5g0033 677 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 5 197 - -
Ahy5g0033 677 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 195 668 - -
Ahy5g0033 677 PANTHER OS02G0152300 PROTEIN 5 197 - -
Ahy5g0033 677 PANTHER OS02G0152300 PROTEIN 195 668 - -
Ahy5g0033 677 SMART Ubox_2 602 665 IPR003613 GO:0004842|GO:0016567
Ahy5g0033 677 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 598 674 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0033 Ahy-Chr5 375314 380192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0033 174 668 U-box Gene Family AT5G65500 51.445 3.94e-174 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Ahy5g0033 PK_Tyr_Ser-Thr 4.20E-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0033 - - ahf:112747336 920.228