Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0013 ATGGCTGAGAACTCAAACCTTCTACTATGTTCCGAAAACAACATCACTTGTTTTGATGATGATGACGATGATGGTGATGATTTGGAGTGTAATGTTGCTGCTGCTGATGGGTCTGGAATCTTACCATGTTGGGACCACAGCAACAACCTTAACTCCGACCAACCATGTCCGAGTTCAGAAAACCGTGGATCGGGTCCATTGTATTGTTTTGATGTTCTGAGTGAAGAAACAATGAAAGACATGGTGGAAAGGGAAAAAGAGCATTTACCAAAGGAGGATTATCTTAAGAGGCTACGTAGTGGGGACTTGGACCTCAGTGGTAGGAGAGAGACCATTGATTGGATTTGGAAGGCTCATTCCTATTATGGTTTTGGACCCTTGACCTTTTGCCTATCTGTGAACTACTTGGATCGCTTCTTATCCTTGTATGAATTGCCGAGAGGTAAAAGTTGGACTATGCAATTGTTAGCTGTAGCTTGCTTGTCGATTGGGGCGAAAATGGAGGAGGTTAAAGTGCCGCAATCCGTCGACTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAACTATTGGTGTTAAGCACATTGAGATGGAAAATGCAAGCTTTAACTCCTTGTTCCTTCATAGATTATTTCCTAAAGAAGATCACTTTCAAGCAACATTTGGCGAATCGGACCATTTCGAGATCAATACAGCTCACCCTTAGCATAATTAGAGGGATTGACTTCTTGGAGTTCAGGCCTTCTGAAATCGCAGTGGCTGTGGCGATTTCTGTTTCAAAGGAGTTGCAACAAGCGAAAGATATCGATAAGGCCTTAGCTAGCTTCTTCATTGCAGAGAAGGAGAAAGTTCTAAAGTGTGTTGAATTGATTAGAGACTTGGCATTGATGAATGTTTCTAATTTTGGTGCAAAACATCATGTGCCATTTGTGCCTCAAAGCCCAATTGGGGTGCTTGATGGTGGTGGATGCTTGAGCTATAAGAGTGATGAATTAACAACACTTGGTTCCTCATGCCCAAATAGTCCAAAAACTAAAAGGTTCAAATCAGAAGGAGGACCTTGTTGTAATGGGACCTCAGATTCATGA 1110 0.4189 MAENSNLLLCSENNITCFDDDDDDGDDLECNVAAADGSGILPCWDHSNNLNSDQPCPSSENRGSGPLYCFDVLSEETMKDMVEREKEHLPKEDYLKRLRSGDLDLSGRRETIDWIWKAHSYYGFGPLTFCLSVNYLDRFLSLYELPRGKSWTMQLLAVACLSIGAKMEEVKVPQSVDLQVGEPKFVFEAKTIQRMELLVLSTLRWKMQALTPCSFIDYFLKKITFKQHLANRTISRSIQLTLSIIRGIDFLEFRPSEIAVAVAISVSKELQQAKDIDKALASFFIAEKEKVLKCVELIRDLALMNVSNFGAKHHVPFVPQSPIGVLDGGGCLSYKSDELTTLGSSCPNSPKTKRFKSEGGPCCNGTSDS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0013 369 PANTHER CYCLIN-D4-1-LIKE 1 357 - -
Ahy5g0013 369 Gene3D - 79 297 - -
Ahy5g0013 369 SUPERFAMILY Cyclin-like 67 207 IPR036915 -
Ahy5g0013 369 SMART Cyclin_C_2 210 338 IPR004367 -
Ahy5g0013 369 SMART cyclin_7 113 201 IPR013763 -
Ahy5g0013 369 PANTHER CYCLINS 1 357 IPR039361 -
Ahy5g0013 369 CDD CYCLIN 107 200 IPR013763 -
Ahy5g0013 369 Pfam Cyclin, C-terminal domain 211 304 IPR004367 -
Ahy5g0013 369 MobiDBLite consensus disorder prediction 348 369 - -
Ahy5g0013 369 Pfam Cyclin, N-terminal domain 78 207 IPR006671 -
Ahy5g0013 369 Gene3D - 91 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0013 Ahy-Chr5 158212 161133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0013 74 284 Core Cell Cycle Gene Families AT5G65420 60.094 9.57e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0013 K18810 - gmx:100794010 431.409