Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g3049 ATGGCTCCAAGTTGGAGTGTTTCAAGCTTGGGTAAGAAGAAAGTGTTGTTCATAATGGGAACAACAGGATCTGGAAAATCGAAACTTTCCATCAACTTGGGGACCCAATTCCCCTGTGAAATAATTAATTCAGATAAAATCCAAGTGTACAGAGGGCTGGACATTGTGACGAACAAGATGGCACCTTCCCAACAAGGTGACATACCCCATCACTTGCTAAGCATAATTGATGATCCTGACTATGATTTCACTGCTAATGAATTCTGCAAAAATGTTCATGATGCCCTTGAACTCATAACCGAAAAAGGGAACATACCCATCATTGTTGGAGGCTCAAACTCTTACATTGAGGCATTAGTGAATGATCCCAAGGGTGAATTTCAATCCAAATATGATTGTTGCTTCATTTGGCTTGATGTGTCTCTCCCTGTTCTGTATGATTACTTAGACATTAGGGTTGATGAGATGGTTGATGCTGGTGTTGTTGATGAGATTCGTCGTGAGGCTTATGATCCCAAGAATTCTGATTATTCTCGTGGGGTTAGAAGAGCCATTGGAGTCCCTGAACTTCATTACTATTTTCACATCCTTCAGAATGATTCAAGTGATGATGTTGATGAGGCTTATAAGACTCGGGTGTTTCTTCATGCAATTGATACCATGAAGATCAACACTCATAAGTTGGCCAAGAATCAAGTCACCAAGATCAAAAGGATGGTCAATGAACTTGGTTGGAAGATGACTAGAATTGATTCTACACAAGTTTTTGAGGCTGTTTTGAGAGGAGAAGATTACAACCATCTTTATCAAGAGATTGTGCTCAAACCAAGTGTGGAGGTTGTTCGGAGGTTCCTAGATTATTGA 864 0.4016 MAPSWSVSSLGKKKVLFIMGTTGSGKSKLSINLGTQFPCEIINSDKIQVYRGLDIVTNKMAPSQQGDIPHHLLSIIDDPDYDFTANEFCKNVHDALELITEKGNIPIIVGGSNSYIEALVNDPKGEFQSKYDCCFIWLDVSLPVLYDYLDIRVDEMVDAGVVDEIRREAYDPKNSDYSRGVRRAIGVPELHYYFHILQNDSSDDVDEAYKTRVFLHAIDTMKINTHKLAKNQVTKIKRMVNELGWKMTRIDSTQVFEAVLRGEDYNHLYQEIVLKPSVEVVRRFLDY* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g3049 287 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 10 286 - -
Ahy4g3049 287 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 10 286 IPR039657 -
Ahy4g3049 287 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 142 247 - -
Ahy4g3049 287 Gene3D - 12 285 IPR027417 -
Ahy4g3049 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 210 IPR027417 -
Ahy4g3049 287 Pfam IPP transferase 48 122 - -
Ahy4g3049 287 Pfam IPP transferase 128 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g3049 Ahy-Chr4 128306566 128309711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g3049 129 286 C2H2 Transcription Factor Family AT2G27760 33.333 1.38e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g3049 K10760 - gmx:121173984 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3415 14 142742096 142745241 Ahy4g3049 4 128306566 128309711 hybridization