Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g3040 ATGGAACGTCAAGGTCGTTTCCTCTTTCAAAATTTCCAGCAACGAGAAGGAAGCTCTTCTGGTTCAAACAAGAACAATAATAATAATGCACGTGGTGAAGAAGATCAATGGTTATTGCCACCTAACAAGGTGGTAGATATCATGCGACAGGTTCTACCATCACATGCACAAATCTCTGAGGATGCAGTAGAAGCAATGCAAGATTGTGTGTGTGAGTTTGTGACACGTGTGACTGTTGAGGCCAACAAGAAGTGCAAATCTGAGGGGAGGAAAACTCTTAGTGTTAATGACTTGTTATTAGCAATGAACGATGATTTGGCCTTAAATAAATATGCTGAGCTTCTTGCAATTTACTACGATCGTTACTCCCTCCAAAATGTGGCTACTTATACGAATTATGAATGCAATAATAATGCAAGTTCATAA 426 0.392 MERQGRFLFQNFQQREGSSSGSNKNNNNNARGEEDQWLLPPNKVVDIMRQVLPSHAQISEDAVEAMQDCVCEFVTRVTVEANKKCKSEGRKTLSVNDLLLAMNDDLALNKYAELLAIYYDRYSLQNVATYTNYECNNNASS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g3040 141 MobiDBLite consensus disorder prediction 13 36 - -
Ahy4g3040 141 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 39 102 IPR003958 -
Ahy4g3040 141 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 17 123 IPR027113 GO:0001228|GO:0006355|GO:0016602
Ahy4g3040 141 Gene3D Histone, subunit A 22 140 IPR009072 GO:0046982
Ahy4g3040 141 MobiDBLite consensus disorder prediction 13 33 - -
Ahy4g3040 141 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 17 123 - -
Ahy4g3040 141 PRINTS CCAAT-binding transcription factor subunit A signature 105 123 - -
Ahy4g3040 141 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
Ahy4g3040 141 PRINTS CCAAT-binding transcription factor subunit A signature 85 103 - -
Ahy4g3040 141 SUPERFAMILY Histone-fold 36 124 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g3040 Ahy-Chr4 128208335 128209520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g3040 33 122 CCAAT-HAP3 Transcription Factor Family AT1G21970 45.556 1.77e-23 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Ahy4g3040 CBFD_NFYB_HMF 1.10E-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g3040 - K08065 psom:113330240 83.5741