Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g3027 ATGGCTGAAGTTGTTGAATACCATGCAAATTCCAACACAAACACCCCTACCACCCCACCATCTTTGAAGCTCTTTGGCATCAACATTCATCACAAGATCTCAAATAAAGATCAAAACACTACTACTACTACTACTCATAAAAAAGAACAACCATGTTTGATGAATCAATCACCATCACCACCACAGAAATCTGAACAAGATAATTGTTCTTTTGATGACCCTTTTAATAACTCATCACCATCATCATCAAGGGATGCAAGAAAATATGAGTGCCAGTATTGTTGTAGAGAGTTTGCAAATTCACAAGCACTTGGTGGGCACCAAAATGCACACAAGAAAGAGAGGCAGCTCCTGAAACGTGCTCAAATGCAAGCTGCACGTGGCTTTGTTGCTTCACACTTTCAAAGCACAATCATGTCATCATCACAGGTGCCACATCTTCTAGCTGTTGGTGGTGGTGCCGGTGTGCCGCCGCCACAACCTTCTTCTCAGGCATCTTCATGGTTCTATTATACAAGTGGTGGTGGCACACCCACCAGCTTTGGTGATAATGCATACCATTCAGGAGGAGCCATGGCTCCCCCTGTAAGTCGTGTCTATGGTGGTGGTGGTGACGACGAAATCTACTTTGAAGAATCTCACATGATCACAACAAATTTGTTACACCACCACCGTTACCAATATCTGTCAAGATTTGATAGTCTTGACAGTAATGGTAACCGTGGTGGTGGTCAACTTAATAGTACTGAACAAGGATTAAGATTGAATTTGCATCTTAGTTTATAA 786 0.4224 MAEVVEYHANSNTNTPTTPPSLKLFGINIHHKISNKDQNTTTTTTHKKEQPCLMNQSPSPPQKSEQDNCSFDDPFNNSSPSSSRDARKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASHFQSTIMSSSQVPHLLAVGGGAGVPPPQPSSQASSWFYYTSGGGTPTSFGDNAYHSGGAMAPPVSRVYGGGGDDEIYFEESHMITTNLLHHHRYQYLSRFDSLDSNGNRGGGQLNSTEQGLRLNLHLSL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g3027 261 SUPERFAMILY beta-beta-alpha zinc fingers 86 116 IPR036236 -
Ahy4g3027 261 MobiDBLite consensus disorder prediction 1 84 - -
Ahy4g3027 261 Gene3D Classic Zinc Finger 63 142 - -
Ahy4g3027 261 MobiDBLite consensus disorder prediction 7 22 - -
Ahy4g3027 261 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Ahy4g3027 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Ahy4g3027 261 PANTHER ZINC FINGER PROTEIN GIS3 12 261 - -
Ahy4g3027 261 MobiDBLite consensus disorder prediction 32 84 - -
Ahy4g3027 261 PANTHER ZINC FINGER PROTEIN 5 12 261 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g3027 Ahy-Chr4 128090866 128092228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g3027 21 149 C2H2 Transcription Factor Family AT1G67030 44.776 3.34e-24 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g3027 - - aip:107638204 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3393 14 142526396 142527758 Ahy4g3027 4 128090866 128092228 hybridization