Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g3019 ATGGACAGTGCCCGGCGAGACGACAGCGAGTGGCGACATAGCGGCGAGCTGCTCCAAGTTCGAGAGAATCCAGGGAGGACGGGGACAGGGGGAAGGAGGACGCCGAACTACGAGAGAGGAAGCAGAGGCGCCGACAGCACGGACGGCGGCGGCACCGCGGCAGAACGGTTGCAGGGAGAACTTAGGGTTTTGGTAAAAAAGATGACCAATTCATTTTGTGAGGAATTAGGAAAAGGAGCATTTGGTGTTGTATATAAAGGTAGTTTAAGCGATAATCGTCAAGTAGCAGTGAAGATATTGAAGGAGTCCAAAGATAATGGAAAAGAATTTAATGGAGAAGAATTGAAGGGAGAAGAATTCATAAATGAGGTTGCAAGTATTATTGGAACAGCTCATGTGAATATTGTCCCATTTTTAGGATTTTGTTACAAGCCAAATAAAAGAGCTTTGATTTATGAATTTATGCCAAATGGTTCTTTAGATAAATTTATTAATGAAGAGGTGTGTAAGTTGGATGGGAGCAGACTCTACCAAATTATAATTGGCATTGCTCGAGGACTAGAATATTTACATTGGAGATGTAATACCAAGATTTTACATCTTGATATTAAACCTCAAAATATTCTTTTGGATGAAGATTTTGTTCCTAAAATTGCTGATTTCGGACTGGCTAAAATATGCACAAAGAAAGAGAGTATTGTATGTCTACAACGCGTAGGAGGAACTGCAGGATATATTGCACCAGAAGTATATAGTCAAATATACACTGAAGTTTCTCGAGTTTCTCATAAATCTGATGTGTATAGTTATGGAAAGTTGATTCTTAAAGTAATGGGAGGAAAAAAGAATTATAATAATAATGATCTACATACCAGTGAAATGTATTTTACAGATTGGATTTATGAAGAGTTGGAGCAAGATAATTTTTCAACAAGATGCTTGACAGACATAGATGATGAGAATGATTTGACAAAGAAGATTATTTTGATAAATTCCTCTTTACTTGAACTATTTGAATATGGGCCTGGCAGTAAGAATCTTACTTAA 1047 0.3782 MDSARRDDSEWRHSGELLQVRENPGRTGTGGRRTPNYERGSRGADSTDGGGTAAERLQGELRVLVKKMTNSFCEELGKGAFGVVYKGSLSDNRQVAVKILKESKDNGKEFNGEELKGEEFINEVASIIGTAHVNIVPFLGFCYKPNKRALIYEFMPNGSLDKFINEEVCKLDGSRLYQIIIGIARGLEYLHWRCNTKILHLDIKPQNILLDEDFVPKIADFGLAKICTKKESIVCLQRVGGTAGYIAPEVYSQIYTEVSRVSHKSDVYSYGKLILKVMGGKKNYNNNDLHTSEMYFTDWIYEELEQDNFSTRCLTDIDDENDLTKKIILINSSLLELFEYGPGSKNLT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g3019 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Ahy4g3019 348 MobiDBLite consensus disorder prediction 1 52 - -
Ahy4g3019 348 PANTHER TYROSINE KINASE FAMILY PROTEIN 64 330 - -
Ahy4g3019 348 SMART serkin_6 70 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g3019 348 PANTHER RUST RESISTANCE KINASE LR10-RELATED 64 330 IPR045874 GO:0004672
Ahy4g3019 348 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
Ahy4g3019 348 Gene3D Transferase(Phosphotransferase) domain 1 155 336 - -
Ahy4g3019 348 Pfam Protein kinase domain 74 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g3019 348 SUPERFAMILY Protein kinase-like (PK-like) 69 299 IPR011009 -
Ahy4g3019 348 Gene3D Phosphorylase Kinase; domain 1 57 154 - -
Ahy4g3019 348 ProSiteProfiles Protein kinase domain profile. 70 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g3019 348 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g3019 Ahy-Chr4 128007191 128010548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g3019 39 330 Receptor kinase-like Gene Family AT5G38280 50.671 5.84e-89 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy4g3019 Pkinase 5.00E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g3019 - - aip:107637474 543.117