Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g3010 ATGGCATACCTTAAATCAGAATCCAAAATTATTATTGGCTTTTATACTCTTGTGCTCTTCTTCATGACCTCTGTCCTTTCTGATGAACGAGAAGCTGCATACATGTTGAAGCTTATGAATGCACTCAAACCCCCTGCCTGGTCCAACACGAAGCCCGTGTGCGACTGGATAGGCGTGGCTTGCAACAATCAAAGTGGAAGGATTGAACAGATCTTTATCAATTCAATGTCACTGACGGGAACAGTTCCTGCAGGCCTCAACGACTCCCTCTCCCAACTCACATATCTCGATCTCTCCGACAATAATCTGAGTGGGCCTGTTCCCTCTCTCGCCAACCTCTCTTTCCTCCAAGTAGCGTACCTCGACAACAACAACTTCACCACCATCCCTCATGGTTGCTTCCATGGTCTTACTAGTTTGCGGCACTTGAGCTTGAATAACAACACCAACCTCCCACCATGGAACTTTCCTACCGATTTGACTGCTCACTCCTCCCATCTCCATACCCTCGACCTGTCTTCTACAAATCTCAAAGGCTCCTTACCACCAAACATATCCCATTCCTTCCCAGTTATGGAGTATCTTTATCTCTCTAACAACAACCTCTCCTCCATTCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGACTAGTCTCCAGTTGGCCAACAACACCAACCTCTCACCATGGACCTTCCCCCTCGATTTGACTCATTCCTCATTGCAACTCTACCACCTCGACCTCGAGGCTACAAATCTCATGGGATCCCTACCATACTTGTCTCATTTCTTCCCACATTTGAACCTAGTCTCACTCTCTAACAACAACCTCTCCTCCATCCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGAATGTCCTCTCTTTGGCCAACAACACCAACCTCAGACCATGGACCTTCCCCGACTTGATTCAGTCCACAAAAATACAAGAGCTCAATCTTGTTGCTACAAATCTCATGGGCTCTCTACCAGAAATATTTGACTCATTGCCAAGTTTGGAGACTCTTCTGCTCTCCAACAACAGCCTCACCGGTGTCTTGCCTGAGTCTTTTGGAAGACCCAATAAGATTACCACATTGCACCTCAACGACCAGAAGGGCAAAGGATTTTCAGGTGTCATTCCACATTCTCTGATAAATCTCAGGAACCTGCAAACTGTTACTTTGAACAACAACTTTTTTCAGGGCCCTATGCCTATCTTTTCCGTAATTACCGAGAGTACGAATGTTGGAGATAACACCACCGATGCCTTTTGTCGAGACAACTTTGATCCTTGTGACGAGAGAGTTACCATTTTGCTTGAAATTGCATCTGCATTTGGATATCCTTATTTGTTGGCCAGTTCATGGCGAGGAAATAATCCATGTCATAATTGGAGTTTTGTTGCATGTACTGCGACTATGATTACAACCGTGAATTTGACAAGGCAGAATTTGACAGGAACTATCTCGGGTGCGTTTGGTAAATTAACTCATTTGGAAAACTTGTATCTGAGTGGTAACAATTTAAAAGGTTCAATACCTGAAAACTTGACCACTCTTCATCAGCTCAAGAATCTCGATGTCTCCCACAACAACTTATCAGGAAAAATTCCCCATTTCTCACGTGGAGTATACCTGAATACTGAAGGTAACCCTTTGTTCAAGAGAAATCCACCTGCTTGGATCAAAGGCGCAATAGCAGCAGCAGCAGGTATTGGAGGTCTTGTTTCCTTGGTTATAGTTATTTGTAACCGAAAGAGGTGTCTTAGCTTCTTACAATGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAATTTATGGATCTTTGATGTTAAGGAGATATAGTTATTCTGAAGTGAAAAGCATGACAAACTCATTTCGTGATAAATTAGGAAGAGGAGGATATGGCATTGTATACAAAGCATGCTTAAGTGATGGTTGTCCAGTAGCAGTGAAGGTGTTGACCGAATCTAGCGGAAGTGGGGAGGAATTCCTGAATGAGGTAGCTAGTATTGGTAGAACTTCTCATATGAATATTGTCTCGCTGTTGGGATTTTGCTATGAAAAATATAAAAGGGCACTCATCTATGAATTCATGCCAAATGGTTCTTTGGATAAGTTTATCTATAAACAAGAATCTCCCAATGCTATTTGTATTTTGGATTGGAATACATTATTTCAAATTACAATTGGTATTGCACGAGGATTAGAATATTTGCACCGAGGATGTGCGACAAAAATTTTGCATCTTGATATTAAACCTCAAAATATTCTGTTAGATGAAGATTTTTGTCCAAAAATTGCTGATTTTGGATTGGCAAAAATATGCAAAAAGAAAGAGAGTATTGTATCTATACAAGGTACAAGAGGAACTCCTGGATACATTGCACCAGAAGTATTTAGCCGAACCTTTGGTAAAGTTTCTCACAAATCTGATGTGTATAGTTATGGAATGTTGATTCTTGAATTGGTGGGAGGTAGAAAGAACTACGACACCGGCGGATCACTTACCAATGAAATGTACTTTCCAGATTGGATTTACAAGGATCTCGAAGAGCAAAATATCCTTGGACGGGGTTTGTCCACTACTGAAGAAGAAAATGATATGATAAAGAAAATTACTTTGGTGAGTTTATGGTGCATTCAAACAAATCCATTGGATAGACCATCAATAAACAAAGTAGTAGAAATGTTAGAAGGACCACTTCAGTCAGTGCCATATCCTCCAAAACCTGTCTTATATTCTCCTCAAATGTCTATCTCACAGTTTTCACGAATCTCCTATAACAGTACAGATGAGGAGGATTCTGAGATTGTTGAGGAGACTATTTCCATCAATAATTCAAAATTTGCAAAATAA 2889 0.4091 MAYLKSESKIIIGFYTLVLFFMTSVLSDEREAAYMLKLMNALKPPAWSNTKPVCDWIGVACNNQSGRIEQIFINSMSLTGTVPAGLNDSLSQLTYLDLSDNNLSGPVPSLANLSFLQVAYLDNNNFTTIPHGCFHGLTSLRHLSLNNNTNLPPWNFPTDLTAHSSHLHTLDLSSTNLKGSLPPNISHSFPVMEYLYLSNNNLSSIPEGCFHNLTSLTSLQLANNTNLSPWTFPLDLTHSSLQLYHLDLEATNLMGSLPYLSHFFPHLNLVSLSNNNLSSIPEGCFHNLTSLNVLSLANNTNLRPWTFPDLIQSTKIQELNLVATNLMGSLPEIFDSLPSLETLLLSNNSLTGVLPESFGRPNKITTLHLNDQKGKGFSGVIPHSLINLRNLQTVTLNNNFFQGPMPIFSVITESTNVGDNTTDAFCRDNFDPCDERVTILLEIASAFGYPYLLASSWRGNNPCHNWSFVACTATMITTVNLTRQNLTGTISGAFGKLTHLENLYLSGNNLKGSIPENLTTLHQLKNLDVSHNNLSGKIPHFSRGVYLNTEGNPLFKRNPPAWIKGAIAAAAGIGGLVSLVIVICNRKRCLSFLQWILWKKTGPFIDNEFEEFMKIYGSLMLRRYSYSEVKSMTNSFRDKLGRGGYGIVYKACLSDGCPVAVKVLTESSGSGEEFLNEVASIGRTSHMNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESPNAICILDWNTLFQITIGIARGLEYLHRGCATKILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSIQGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELVGGRKNYDTGGSLTNEMYFPDWIYKDLEEQNILGRGLSTTEEENDMIKKITLVSLWCIQTNPLDRPSINKVVEMLEGPLQSVPYPPKPVLYSPQMSISQFSRISYNSTDEEDSEIVEETISINNSKFAK* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g3010 962 SUPERFAMILY Protein kinase-like (PK-like) 613 908 IPR011009 -
Ahy4g3010 962 SUPERFAMILY L domain-like 434 561 - -
Ahy4g3010 962 Pfam Protein kinase domain 638 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g3010 962 Pfam Leucine rich repeat 477 534 IPR001611 GO:0005515
Ahy4g3010 962 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Ahy4g3010 962 Pfam Leucine rich repeat 315 370 IPR001611 GO:0005515
Ahy4g3010 962 Pfam Leucine rich repeat 91 148 IPR001611 GO:0005515
Ahy4g3010 962 SMART LRR_typ_2 497 521 IPR003591 -
Ahy4g3010 962 SMART LRR_typ_2 137 158 IPR003591 -
Ahy4g3010 962 SMART LRR_typ_2 113 136 IPR003591 -
Ahy4g3010 962 SMART LRR_typ_2 288 309 IPR003591 -
Ahy4g3010 962 SMART LRR_typ_2 213 234 IPR003591 -
Ahy4g3010 962 SMART LRR_typ_2 337 360 IPR003591 -
Ahy4g3010 962 SMART LRR_typ_2 189 212 IPR003591 -
Ahy4g3010 962 SMART LRR_typ_2 264 287 IPR003591 -
Ahy4g3010 962 SMART LRR_typ_2 90 112 IPR003591 -
Ahy4g3010 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 757 769 IPR008271 GO:0004672|GO:0006468
Ahy4g3010 962 PANTHER TYROSINE KINASE FAMILY PROTEIN 32 946 - -
Ahy4g3010 962 SMART LRR_sd22_2 497 520 - -
Ahy4g3010 962 SMART LRR_sd22_2 90 115 - -
Ahy4g3010 962 SMART LRR_sd22_2 521 549 - -
Ahy4g3010 962 ProSiteProfiles Leucine-rich repeat profile. 499 522 IPR001611 GO:0005515
Ahy4g3010 962 SMART serkin_6 634 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g3010 962 Gene3D Transferase(Phosphotransferase) domain 1 709 915 - -
Ahy4g3010 962 Pfam Leucine rich repeat N-terminal domain 438 471 IPR013210 -
Ahy4g3010 962 Pfam Leucine rich repeat N-terminal domain 31 62 IPR013210 -
Ahy4g3010 962 ProSiteProfiles Leucine-rich repeat profile. 266 287 IPR001611 GO:0005515
Ahy4g3010 962 ProSiteProfiles Protein kinase domain profile. 634 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g3010 962 ProSiteProfiles Leucine-rich repeat profile. 92 114 IPR001611 GO:0005515
Ahy4g3010 962 Gene3D Ribonuclease Inhibitor 435 558 IPR032675 -
Ahy4g3010 962 PRINTS Leucine-rich repeat signature 337 350 - -
Ahy4g3010 962 PRINTS Leucine-rich repeat signature 93 106 - -
Ahy4g3010 962 ProSiteProfiles Leucine-rich repeat profile. 191 212 IPR001611 GO:0005515
Ahy4g3010 962 SMART LRR_bac_2 264 283 - -
Ahy4g3010 962 SMART LRR_bac_2 337 357 - -
Ahy4g3010 962 SMART LRR_bac_2 521 541 - -
Ahy4g3010 962 SMART LRR_bac_2 497 517 - -
Ahy4g3010 962 SMART LRR_bac_2 189 208 - -
Ahy4g3010 962 SMART LRR_bac_2 90 110 - -
Ahy4g3010 962 SUPERFAMILY L domain-like 51 407 - -
Ahy4g3010 962 ProSitePatterns Protein kinases ATP-binding region signature. 640 662 IPR017441 GO:0005524
Ahy4g3010 962 Gene3D Ribonuclease Inhibitor 27 158 IPR032675 -
Ahy4g3010 962 PANTHER RUST RESISTANCE KINASE LR10-RELATED 32 946 IPR045874 GO:0004672
Ahy4g3010 962 Gene3D Ribonuclease Inhibitor 159 303 IPR032675 -
Ahy4g3010 962 CDD STKc_IRAK 640 910 - -
Ahy4g3010 962 Gene3D Phosphorylase Kinase; domain 1 607 708 - -
Ahy4g3010 962 Gene3D Ribonuclease Inhibitor 304 426 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g3010 Ahy-Chr4 127940886 127944686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g3010 620 930 Receptor kinase-like Gene Family AT5G38280 60.000 1.92e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy4g3010 Pkinase 3.40E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g3010 - - aip:107637469 1486.86