Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g3007 ATGAGATACCGGGTTTTGCAAGCATACCCGGAAAACCAAACCATGAAGATAGCAAGAGTTGACTACTTTGAAGGTCTATGCCCTTCAAAAGCAGTAAACACAAGCCTTGACTTTGAGCTCTTTGATTATGGGCCTGGCAATAAGAATCTTACCCTCTTCTATCATTGTTCTTTAAATAATGGATTGTCCAATTCCATCCCCGGATTTCTTAATTGTTTCTCAAATAGAACTTCAGATGAATACTTTTATGCTAGGCCTGAAGCTCTAGGTGCTCCTCCTTCTAGTGTTGTTTGCACAACAAGTGTGTTTATTCCATTGTTGTTGCAATTTGATGTTAAAGTGGAGTTGACATGGAACAACATAGAAGGTGCTATCCAAAATGGATTCTTGGTGAAATGGATAGGAAGTGTAGCAGAATGTTTCAAGTGTATGAACACAGGTGGAGCCTGTGGCTATGATTTGAATTCAAATCAACCAACATGTTATTGCAAAGATCAGTCTGGCTATTCATATTTGGATGATGGGCACATCAAAATCTGTGATGCTTCTGCCACCTCACCAACTCAAGATGATCTTGGACGTTCAGGGAAAAGTACTAACAAAGCAGCTATTGCAGCAGGTGCTACCTCAGGAGCTGTAGTCTTTGTTGTCCTTCTTATAGGTACACTTTTTGTGATAAGAAGAAGGAGAAGAAATGCTGAAAGATCAAGAAGCAACAAGGATATTTTGCCTTTGAGTGGAGTCCCTCTTACATCTTCAACTACAAGTAGTAGTAACACATCTCAGAGTGTTTCTTCTTACCCTTCCTCCAAGTCAGATTCTGTGCCAAAGAGTTACTACTATGGTGTTCAAGTGTTTGACTATGCTGAACTTGAAGAAGCTACCAACAATTTTGACCCTTCTAGAGAACTTGGCGAGGGAGGCTTTGGCACTGTTTACAAAGGTATGCTTCAAGATGGGCGTGTAGTTGCAGTGAAACGCCACTATGAAAGCCATTTAAAGCGTGTTGAGCAGTATATGAATGAAGTTGAGCTTCTAGCACACTTGAGGCACAAGAATTTGGTCACACTCTTTGGCTGCACTTCAAGACACAGCAGAGAACTCATCCTTGTTTATGAGTTCATACCTAATGGAACACTAGCCGATCACCTCCATGGAAGCCTTGCAAATTCCACCTTACTTACTTGGAATGTAAGATACAAAGTTGCACTCGAAACAGCCGAGGCGCTTTCCTACCTTCATTCTAAGAAAGTCATACACAGAGATGTTAAGTCCACAAACATTCTGCTGACAGAGACTTTTCAAGTTAAGGTTGGTGATTTTGGACTATCAAGGTTGTTTCCTAAATTTGTTACTCATGTCTCAACAGCGCCACAAGGCACACCTGGCTATGTTGATCCGGAGTATTACCAGAACTACCAATTGACCGATAAGAGTGATGTTTATAGCTTTGGGGTGGTGTTAGTTGAGCTTATATCTTCACTGCAAGCAGTGGACATAACCCGGAACCGGAATGAAGTTAACTTGGCTAGTCTTGCAGTGAATAGGATACAGAACCAAGAATTGCATGACATGGTTGATCCATGTCTTGGATTTGAGAAGGACAATGATGTAAGGAGGATGGTAACTGCTGTTGCTGAATTGGCATTTAGGTGCTTGCAGCAGCAGAGAGATATGAGGCCCTCCATGGATGAGGTTCTTGAGATCTTGAGAGGGGTAAAGGGTGATGAGTTTGGTGCATTAGAGAGAAACTCATCAGAGTCAGCGGTGGGTGTTAACCATAATAAGACAGAGGAGGTTATACTTTTGAAGAAGGTTCTACCACCAGTTTCACCAGATTCTGTTGCTGATAAATGGGTTAGCAGCTCTTCTACATCTAGCACTTCATAG 1890 0.4175 MRYRVLQAYPENQTMKIARVDYFEGLCPSKAVNTSLDFELFDYGPGNKNLTLFYHCSLNNGLSNSIPGFLNCFSNRTSDEYFYARPEALGAPPSSVVCTTSVFIPLLLQFDVKVELTWNNIEGAIQNGFLVKWIGSVAECFKCMNTGGACGYDLNSNQPTCYCKDQSGYSYLDDGHIKICDASATSPTQDDLGRSGKSTNKAAIAAGATSGAVVFVVLLIGTLFVIRRRRRNAERSRSNKDILPLSGVPLTSSTTSSSNTSQSVSSYPSSKSDSVPKSYYYGVQVFDYAELEEATNNFDPSRELGEGGFGTVYKGMLQDGRVVAVKRHYESHLKRVEQYMNEVELLAHLRHKNLVTLFGCTSRHSRELILVYEFIPNGTLADHLHGSLANSTLLTWNVRYKVALETAEALSYLHSKKVIHRDVKSTNILLTETFQVKVGDFGLSRLFPKFVTHVSTAPQGTPGYVDPEYYQNYQLTDKSDVYSFGVVLVELISSLQAVDITRNRNEVNLASLAVNRIQNQELHDMVDPCLGFEKDNDVRRMVTAVAELAFRCLQQQRDMRPSMDEVLEILRGVKGDEFGALERNSSESAVGVNHNKTEEVILLKKVLPPVSPDSVADKWVSSSSTSSTS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g3007 629 Gene3D Transferase(Phosphotransferase) domain 1 375 579 - -
Ahy4g3007 629 SMART serkin_6 298 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g3007 629 Gene3D Phosphorylase Kinase; domain 1 269 374 - -
Ahy4g3007 629 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Ahy4g3007 629 SUPERFAMILY Protein kinase-like (PK-like) 271 570 IPR011009 -
Ahy4g3007 629 Pfam Protein kinase domain 301 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g3007 629 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 2 629 - -
Ahy4g3007 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Ahy4g3007 629 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 2 629 IPR044652 -
Ahy4g3007 629 Pfam Wall-associated receptor kinase C-terminal 94 166 IPR032872 -
Ahy4g3007 629 MobiDBLite consensus disorder prediction 245 275 - -
Ahy4g3007 629 MobiDBLite consensus disorder prediction 610 629 - -
Ahy4g3007 629 ProSiteProfiles Protein kinase domain profile. 298 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g3007 629 MobiDBLite consensus disorder prediction 235 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g3007 Ahy-Chr4 127914395 127927293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g3007 140 629 Receptor kinase-like Gene Family AT1G25390 46.356 1.32e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy4g3007 Pkinase 5.50E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g3007 - - aip:107635700 1197.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3372 14 142354864 142362823 Ahy4g3007 4 127914395 127927293 hybridization