Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2995 ATGGCTTGGTTACGCTTGGATAATCGTTGCGATTCTGAATCTGTCGCTTCACTTCCATGGCTTTGGTCCATTCAACATGTTGCAAGCTGCAAGGAAATGGACGTGACTACTTTACAGAGTTTGGTTGATGTAGCCCTTGTTGCGGAAGATGGTTTCTGTGAAAAGACAAGGGAATTGATTTCCCTGAGATGTTTGGAGGCAATGTTTGATCCTGATTCGGCTCATAGAGTTGATTGTGATGATGCTGCTGCAACTAGCCTGGATTCGAGAGTTCGGTTTGCTTTTTCGACAACTTGTGAAGATGTCCTTCGACAGATAGTGGGCGAGGTACCAGTATCAAATCTAATAAAAGATCGAGTTAAGCTTTTGAAATGGGATGTTTCCCAGTTTATTTTGCATAAAAGAGCTGTTCTCAAATGTGACTTAGTGCAGCTGAAAGAATCAATCCTTGATGGTACTCATCCAAATGCTGATTGTTTAAGAGAAACTGGGCGATTGCAACCTCAGAATGGGGGTTGTCAAGTGCATCTCAATGACAATGCACATCGTGATCTTTCGAAAAAAGATAATGGGAACAGCACTTATCATGCAGACAAGGAAGTAAAAGAGAACTCAATATCTACAATGTTAGAAAAAGTGACTAAACAATGGAAAGAGTTACTTGAAAAGATTAAACGTTGCAAGAGGAACCAGGTTGAGTCAGTTAATGGTAATGAGCATATGACAGAATGCCAACAAGGAAAGCAAGTTGATATCAGTGAATGGCATGTTTGCCAAGGAAGTGCAAAGAAGATTAGACATAATGAATCTTTAAATGTTGAGTCCAACAAAGAGAAGCCAATCTCTCATGGAGTGGGTAGGTATGATAGGTGGTTTGCTTCCAAGCAATTAGACTCCAGAAGCCACAATGAGGTCCTTCATCATGAGCCACAAATTCCCTTTAGTGCTACAATGACTCTTCAGCATAAATCTGGAGATGAATGCAATCTGGAACAGGAAGATGAACCTATTCCAACGAAAGCTTTGCCTGCAACTGGAATCCTTCATGGAAATGAAAATGATACTGCTCATGAAGTTCCAAATGTAATTAGCGAGTCAAAGTCTAAAAGAACGGAAGTTCCTCAAGTGAGAGAACCAAATGCTACTGATGACAAAGCTGTGGAACATACTGTTAATGGTTGTGTGATAGAGGTATCAAGTGATGAAACAATGGGATCTGATAATGATATCTCAGAAAGTTCTAGTCTGAAAGAAACCAATGGTTGTATGAGGTGCAAAAAAGATGGTAAATTGCTGGTTTGTAGAACAACCACTTGTTCAACCATGATTCATGCAAGCTGTCTGTCAACATCTCCTCATTTTGATGCAGAAGGGGACTTTTTCTGCCCATATTGTGTATATGCAAAATCTATTTCAATATATATTGAAGCTAAGAGAAAGTTTTTCTTGGCAAGACAAGGACTAGAGAGGTTCATTTGCAATGATTTATGGAAGGTATCATAA 1503 0.3952 MAWLRLDNRCDSESVASLPWLWSIQHVASCKEMDVTTLQSLVDVALVAEDGFCEKTRELISLRCLEAMFDPDSAHRVDCDDAAATSLDSRVRFAFSTTCEDVLRQIVGEVPVSNLIKDRVKLLKWDVSQFILHKRAVLKCDLVQLKESILDGTHPNADCLRETGRLQPQNGGCQVHLNDNAHRDLSKKDNGNSTYHADKEVKENSISTMLEKVTKQWKELLEKIKRCKRNQVESVNGNEHMTECQQGKQVDISEWHVCQGSAKKIRHNESLNVESNKEKPISHGVGRYDRWFASKQLDSRSHNEVLHHEPQIPFSATMTLQHKSGDECNLEQEDEPIPTKALPATGILHGNENDTAHEVPNVISESKSKRTEVPQVREPNATDDKAVEHTVNGCVIEVSSDETMGSDNDISESSSLKETNGCMRCKKDGKLLVCRTTTCSTMIHASCLSTSPHFDAEGDFFCPYCVYAKSISIYIEAKRKFFLARQGLERFICNDLWKVS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2995 500 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 12 493 - -
Ahy4g2995 500 Coils Coil 210 230 - -
Ahy4g2995 500 SUPERFAMILY FYVE/PHD zinc finger 416 470 IPR011011 -
Ahy4g2995 500 SMART PHD_3 421 466 IPR001965 -
Ahy4g2995 500 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 12 493 - -
Ahy4g2995 500 ProSiteProfiles Zinc finger PHD-type profile. 419 468 IPR019787 -
Ahy4g2995 500 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 477 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2995 Ahy-Chr4 127847113 127850341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2995 395 467 PHD Transcription Factor Family AT5G12400 30.137 1.58e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2995 - - adu:107486924 983.786