Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2958 ATGGTCTTCCCTTCTCTTCCAATCTATCTTGATCCACCCAACTGGTCACAACAGCAGGGTAATCAGCAATTAGGAATTGGCTCTCAAAATCTTCCAGTTCCGCCAATTTTACAGCCACCACCTCCAACGACTGCAGTAGTCGTTGGAGGTGGTGGCTACCAGGGCTCTATTCGTCCAGGATCAATGGCGGATAGAGCCAGGCTGGCAAAGATACATCAACCAGATGTATCACTCAAGTGTCCGAGGTGCGAATCCACGAACACCAAGTTCTGTTACTACAACAACTACAGCCTCTCGCAGCCTCGCCACTTCTGCAAGACTTGCCGCCGGTACTGGACGAGAGGCGGCGCACTGAGGAATGTTCCGGTTGGCGGCGGATGCAGAAGGAACAAGAGAAGCAAAGGAACAACAAACTCCAACACCAACAGATCTAGGTCTCCTTTGAAACCTGATCATCATCATCATCATCTTAATCTGCATGGTGGTGCAGTTGGAGGTTCTAGCTCCGCAAGTGGCAACTCTTCTTCCAGTGGCCGCAATAATAGTAACAGCAACAACAACAACAATGATCTGAATGTGATGAATCATATGCAAACTCCACCACCAACCCATCATCATCATCATCAATTTCCGTTCTTGCCAACAACAACTTTGCATCACTATAGTAGTGATCATGCATCATCACTTCTTTTTGGCCCAAACCCTCCTCCATCTTCTTTGTTGGTTAGAAATGGTGGCAACACAGGTAGTGATGGCGAGTTTCAAATTGGAGCTAATAACAATAACAATGGTGGTTCTGTGTTACAGCAATGGAGGCTACCAAGTTTGCAACAGTTTCCTAATTTCTTGAGTAATTTGGAACCGCCACAACCACAACCGCAACCGCCACAAATCGGTTTGTTTCATCAATTTGATCAAGAAAATGGTGAATATGTGAGGGACCATCATGGAGGTAGGTTTCGTTGTTCTAGTAATAGTAACATTAATAAGACAATGGCTGATGATTCTGGTGTTGTCGTTGTTGGTGGAATGATACCTCATCATCAGGTTAACAATAATTCGGTGAAAATGGAAGAGAATAATAATAGTAAAAATAATAATCAAGGAGGGTTGAGTTTATTTTCTAAGAATAATGTTTTGGGTAGCAATGATCTATTTTGGAGTAGTAGTAATGGTGGAAGTGGCAATGTTAATGCATGGAATGAAGCTCCTAGTTTCGCTTCCCCGACAAATCAGTTATTGTGA 1245 0.4369 MVFPSLPIYLDPPNWSQQQGNQQLGIGSQNLPVPPILQPPPPTTAVVVGGGGYQGSIRPGSMADRARLAKIHQPDVSLKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGTTNSNTNRSRSPLKPDHHHHHLNLHGGAVGGSSSASGNSSSSGRNNSNSNNNNNDLNVMNHMQTPPPTHHHHHQFPFLPTTTLHHYSSDHASSLLFGPNPPPSSLLVRNGGNTGSDGEFQIGANNNNNGGSVLQQWRLPSLQQFPNFLSNLEPPQPQPQPPQIGLFHQFDQENGEYVRDHHGGRFRCSSNSNINKTMADDSGVVVVGGMIPHHQVNNNSVKMEENNNSKNNNQGGLSLFSKNNVLGSNDLFWSSSNGGSGNVNAWNEAPSFASPTNQLL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2958 414 MobiDBLite consensus disorder prediction 131 145 - -
Ahy4g2958 414 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 379 IPR045174 GO:0003700|GO:0006355
Ahy4g2958 414 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Ahy4g2958 414 MobiDBLite consensus disorder prediction 119 210 - -
Ahy4g2958 414 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Ahy4g2958 414 MobiDBLite consensus disorder prediction 164 199 - -
Ahy4g2958 414 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 9 379 - -
Ahy4g2958 414 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2958 Ahy-Chr4 127490413 127492581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2958 1 134 C2C2-Dof Transcription Factor Family AT2G37590 58.621 1.38e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy4g2958 zf-Dof 1.60E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2958 - - adu:107486952 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3325 14 141925943 141928111 Ahy4g2958 4 127490413 127492581 hybridization