Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2929 ATGGCAGTCCAAAGAATTGCAATTGGGTCTCCTGGAGAGGCTGCTCAGCCTGATGCAATTAGAGCAGCATTTGCAGAATTCTTCTCATTGCTTATTTTTGTTTTTGCTGGTGATGGCTCTGGCATGGCTTATAATAAACTAACAAACAATGGACCAGCAACACCATCTGGCCTGGTAGCTGCATCATTGTCCCATGCATTTGGTCTTATTGCGGCTGTCTCTGTTGGTGCAAACGTTTCTGGTGACCATGTGAACCCTGTTACTTTTGGTAACTTCATTGGAGGAAACATAACCCTTTTGAGGAGCATTTTGTATTGGATTGCACAGTTGCTTGGTTCAGTTCTTGCTTGCATTCTTCTCAAGTTTGCTGCTGGAGGAATGGAAACAACAGGTTTCTCATTATCCTCTAGTGTGTCAGAATGGAATGCATTGGTGTTTGAAATAGTGATGACATTTGGGTTAGTGTACACAGTTTATGGCACAGCAGTGGATCCAAAGAAAGGAAATGTGGGAATTGTAGCCCCAATTGCAATTGGATTCATTGTGGGTGCAAACATCTTAGTAGGTGATGCATTTGATGGTGCATTAATGAATCCAGCAGTGTCATTTGGTCCTGCTGTTGTTAATTGGTCATGGACTCATCATTGGGTGTATTGGGTTGGCCCCTCCATTGGTGCTGCCATTGCTGCCATTATGTATGATAATATCTTCATTGGTGATGGTCAGGAACCCCTTTCAAGCAGTGACTACTAG 753 0.4329 MAVQRIAIGSPGEAAQPDAIRAAFAEFFSLLIFVFAGDGSGMAYNKLTNNGPATPSGLVAASLSHAFGLIAAVSVGANVSGDHVNPVTFGNFIGGNITLLRSILYWIAQLLGSVLACILLKFAAGGMETTGFSLSSSVSEWNALVFEIVMTFGLVYTVYGTAVDPKKGNVGIVAPIAIGFIVGANILVGDAFDGALMNPAVSFGPAVVNWSWTHHWVYWVGPSIGAAIAAIMYDNIFIGDGQEPLSSSDY* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2929 250 PANTHER AQUAPORIN-8 1 250 IPR034294 -
Ahy4g2929 250 Gene3D Glycerol uptake facilitator protein. 4 249 IPR023271 -
Ahy4g2929 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2929 250 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2929 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2929 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2929 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2929 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2929 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2929 250 PANTHER AQUAPORIN TIP1-1 1 250 - -
Ahy4g2929 250 Pfam Major intrinsic protein 15 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2929 250 SUPERFAMILY Aquaporin-like 16 240 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2929 Ahy-Chr4 127234698 127236291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2929 1 250 Major Intrinsic Protein MIP AT4G01470 78.968 2.61e-140 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2929 K09873 - gmx:100788583 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3296 14 141670228 141671821 Ahy4g2929 4 127234698 127236291 hybridization