Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2908 ATGGATTATTCTTCTTCGTTATCTTCTCTGAGCTTTCATTTCAATAGCTTCAGAGCTTCAGCGAACTCGTTCCTCTCACAATACGAACCTCTTCTTCTGCTTCTCGCTCCTCTCTTCTCTCTCATCCTCGCACACTTGCTTCGCTCATTTTTCAATCTCATCCATGAAAGAGGCCTCAAAGCTTCGCTCCTAGGGTTTCTTATGAGCTCTGTCAAATTGATCCCTGGAGTGAAGAGTTACATTGATAGAGAAAAGCAGAAGGTTGTGGATAAAATGCAGTCTGATGGTAAATCTAAAAGAGAAGGTTGGAGAACAGAGTTGCCAAGCACAGGACTAGGCACTTTAGTACTTGAGAAAATGAAAGAGGAGAAAAGAAAAGATGTGGCTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGTGGAAGTGAAATTGATGGACATTTTTCTCTGATAAATGAAGCATGCTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTCCAGAGTGTTGGACGCTTTGAGGCAGAAGTGGTTGCAATGACTGCAGCACTTCTTGGAAGTCAGGAAAAAAGTTCTGGAGGACAAGTATGTGGCAATATGACATCAGGAGGGACTGAAAGTATATTATTAGCGGTCAAATCATCTCGTGATTATATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATAATTCCTGTGTCTGCACACTCAGCATATGACAAGGCTGCACAGTATTTCAATATCAAACTATGGCGTGTTCCAGTTAACAAAGACTTCCAAGCGGATGTAAAAGCAATTCGACGCCATATTAACAAAAATACCATCTTGATTGTTGGATCCGCTCCAGGGTTTCCTCATGGAATAATTGACCCTATTGAAGAACTTGGTCAGTTGGCATCAAGCTTTGGTATTTGTCTCCATGTAGACCTTTGCCTGGGTGGCTTTGTATTGCCTTTTGCCCGTGAGCTTGGGTACCCTATACCACCTTTTGATTTTTCTGTTAAAGGAGTATCTTCAATATCAGTGGACGTGCATAAATATGGTTTAGCTCCCAAAGGAACAAGTATAGTCCTGTATAGAGACCATGAAATCAGAAAGCATCAATTTGTTGCGGTTACCGAGTGGAGTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGGGGTCTAATTGCAGGGGCATGGGCAGCAATGATATCTCTAGGGAAAGAAGGTTACTTGGAAAACACGAAAACAATTATGGAAGCAACAAAAAGAATACAGAAAGGCATAGAAGAAATTTCTGAGTTGTATGTTGTTGGAAGACCCGACATGACCATTGTGGCTTTTGGATCTAATGTCCTGGACATATTTGAAGTCAATGATTTGATGACATCCAAAGGGTGGCATTTGAATGCTTTGCAGAGACCCAACAGCATCCATATCTGCGTGACACTGCAGCATGTGCCAGTTGTTGAAGACTTCCTCACTGATTTGAAGGAATCCGTTGAAACTGTGAAGGAAAATCCTGGTCCTATAAGTGGAGGCCTAGCACCGATATATGGTGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGACTTGCTGGTGGATTATATGGACGGTACCTGCTAG 1638 0.4274 MDYSSSLSSLSFHFNSFRASANSFLSQYEPLLLLLAPLFSLILAHLLRSFFNLIHERGLKASLLGFLMSSVKLIPGVKSYIDREKQKVVDKMQSDGKSKREGWRTELPSTGLGTLVLEKMKEEKRKDVAWQGKCSGTVYIGGSEIDGHFSLINEACSMFAHTNPLHLDVFQSVGRFEAEVVAMTAALLGSQEKSSGGQVCGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVNKDFQADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGQLASSFGICLHVDLCLGGFVLPFARELGYPIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRDHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGGLIAGAWAAMISLGKEGYLENTKTIMEATKRIQKGIEEISELYVVGRPDMTIVAFGSNVLDIFEVNDLMTSKGWHLNALQRPNSIHICVTLQHVPVVEDFLTDLKESVETVKENPGPISGGLAPIYGAAGKMPDRGMVQDLLVDYMDGTC* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2908 545 Gene3D - 106 542 - -
Ahy4g2908 545 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 25 545 - -
Ahy4g2908 545 Pfam Pyridoxal-dependent decarboxylase conserved domain 175 450 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy4g2908 545 SUPERFAMILY PLP-dependent transferases 84 508 IPR015424 -
Ahy4g2908 545 PANTHER - 25 545 - -
Ahy4g2908 545 Gene3D Aspartate Aminotransferase, domain 1 114 508 IPR015422 GO:0003824
Ahy4g2908 545 Gene3D - 142 409 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2908 Ahy-Chr4 127085715 127091663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2908 161 505 Calmodulin-binding Proteins AT3G17760 25.956 2.12e-24 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3274 14 141521245 141527193 Ahy4g2908 4 127085715 127091663 hybridization