Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2900 ATGGCAGCTTCACCATCAGATCACGATTCAACAGCATTGTCATATTTCAAGTATGATGTTTTTCTGAGCTTCAGAGGCCACACAAGATGCGAATTCACAGACGCACTCTATCATGCTTTGGTCAACAAAAGAATCGAGACTTTCAGAGATAGCGAGAAGCTCAGAATAGGCCAGGAACTGGAAGGTGCTCTTGTTGAAGCAATTGAAAGATCAAGGATGTCAATTCTTATACTGTGTGACGAGTATCCAACTTCCAAGTGGTGCCTTGATGAACTCGTCAAGATCATGGAGTGTTCCGGCAACGGAACAAAGCGACCGGTGTTACCGGTCTATTTCCGTGTGGCAAAATCAGATGTGCAGTTTCAGAAAAATAAGTATGAAACAGCCATGGCTGCTCATGAAGAAAAAGGAAGAAACAACCACAAGTTGGAAGCATGGAGGTCAGCGTTGTCTGAAGTAGGCAAGATTTATGGTCAACGCTGTGATCAGAAAACAGCATGGGGTGAGGCTATTGACAACATTGTTGAAGAGGTCACAAAAAGACTTCCTCCTTTGCCTCTGTATATCGACCGTCCACTTGGATGTGATTCTGAACTTGAGGAGGCAAAATCACTTCTAGAGATTGGTTCTCATGTTACCTGTTTCATGCTGGGAATTCATGGAGATGGTGATGAAATAAGCAAATTTGTTGCGGAGCTGTATAACAAGATTAGGCCTCACTTTGTAACTGCAAGTTTTCTTTCCAATATCAGTGAGAAGACAAATGAAAGTGGTGGTGGCCTAGAACATCTACAAGAGACTCTTCTTTCTGAGATGGGAGAGGAGGTCAGGACTAAGATTGGAAGCACATTCAAAGGATCCTCTGAAATAAAACAAAGACTAGGCCGAAAAAGAGTTCTTCTGGTTTTGGATGATGTTGATAGTATACAACAACTGGATTCACTAGCTAGAAGAACTGATTGGTTTGGTCCTGGTAGTAGGATCATTATAACAACAAGATATGAAGATGTGCTAGATGATCATATTTTGAACAATGGTGTTGAGGTTAAGAAATATTGCATCGCTGAAGGAAGTAGTTCTACTGTGAAGGAAGAAAATGTAGTGGGATTGGAGAAAGATTTTGAAATTGTGATTAATCAACTCAAGGAAGAAGATTCTCCTGGGAATGTTGTTTCCATTGTTGGCATGGGTGGGTTAGGAAAGACTACCCTTGCTCGAAAGATCTACAATAGCGATGAGGTGAAGATGTTATTCCCTTGCCGTGCATGGGCAACTGTTTCCAAGGATTACAGTGGAAAGGAAGTTTTTAAAAGCCTTCTCAAGTGTCTGAAGCCGTCTGCATCTAAATTTGAAGATTCAAGCAGTGAAGAGGAGCTAAAGCAGAAGGTGAAGAAATGTCTGAAAGGAAAAAAGTACTTGGTAGTCCTTGATGATGTTTGGGACAGTAAAGCATGGCGCACTATAAAGAATTGTTTCCCAGAAAACAACAATGGTGGCATGATACTAGTAACTACTCGTAATGATCAGGTGGCTTATGTTTCAGAGTCAAAGAAACCTCATCACAAGCTTTCCTTTATGGATAAAGAAAGAAGTTGGGAACTGTTTCACAAGGAGGTTTTCTGCAGAAGAAATTGTCCTCCTGAGCTAGAATCTATTGGCAGATCAATTGTTGAAACTTGCAAGGGTTTACCATTGGCTATCAAAACCACAGCTGGGCTTGTTGCAAAGAGGGAGAGGTCAGAGGATGCATGGGAAGAAATCATGAATTTACTGCCTTATTGGAGTGTTGCTGATGAGGATAGTAGTGAGGAGATGATGGAGCTTTTGAAGTTTAGCTATGATGATTTGCCCAACAAAATGAAGCCATGCTTTCTATATCTTGGGGTGTTTCCTGAAGATGAAGAGATTTGGGTGAGAGACTTAATCCGTCTATGGATAGCAGAAGGGTTCATAGAGCCAATCCAAACTGGAAGATCAAAATCACCACCACAACTTGAAGATATCGGTGAGCAATACTTGAAGGAGCTAGTGGATCGTAACTTGGTACAAGTGGCGAACAGGAGGAGTGATGGCAAAGGCGTGAAAACATGTCAGATCCATGATCTCTTCCGGGAATTGTGCATATCAGAGAGCAACAAACCGGATAACAACATTAAAAGTGCTGGTAGACTGTCCTTTCCTGGGGATATAGGATCCTATTCATGTTTAGTAACATGTAATCAATCATGCACTTGTTCCTTGTTCGTTTATGATGGTACACGAGAGTGGCCACATTATATTCCAGAAGATTGCCGAGTTAATGTGATATATTTTGCATATGGGTACACATATCTAAATGAGTATTTGAAGGAGTTGGAAAGTCTCAAGTTCTTGAAAATGTTCCTCTGTGAATCATACGAGTTATGTAAGCTTCAGAGTTTAAAAACGTGTCATGTGATGATCTTTAAGAAAGACCTAAGTATTGGGAGGTTAAAGCAACTGAGACATCTTCGTTGTGGAACTGAGTTGAATTTATCAGTAGATGAAGAAGTAGTAAAAGATAAAATGCAGAATCTCCAAACACTATGTTATGTGTCTGCCGATTCACAACTAGGGAGCTTACTCGACAATGGTTGCTTTCCCAACCTGAGAAAACTGGGTGTAAGTATAAATAAAGACCAAGGTTCAGCTGACGAAAACTTAAGGAGCCTGTACTGCCTAAACAACCTACGTAAGCTGGTACTTATATTTGGAGATGGTTGTGTTACATTAGATAGAATTGCATTTCCTTCAAATATTACCAAAATTTCCTTGTCAAGCTTTAAAGATTTGAAATCTAAAGATATGAATACCTTGGGACAAATTCCCAGCCTTCAGATTTTAAAACTGATATATGGAAGCTGTGAGGAAGAAACTCTTAATTGTGGTGCTGCTGGGAGCTTTCTGCGGCTTCAATTGTTTATCATGGACAGTGTGGATATCACATGTCTTACATCAGAAGAAGGTGTGATGCCTCGCCTTCGCCGTGCAGTCTTCTATAACTGCCCTGACTTAAAGGAGGTTACTAAACAAATGCGTTCATTGGGTAGTAACTTGGAGTTTATAGAATATGATGTTAATCATCGTTTATCTCTTGGGGGTAGTAACTTGTAG 3132 0.4049 MAASPSDHDSTALSYFKYDVFLSFRGHTRCEFTDALYHALVNKRIETFRDSEKLRIGQELEGALVEAIERSRMSILILCDEYPTSKWCLDELVKIMECSGNGTKRPVLPVYFRVAKSDVQFQKNKYETAMAAHEEKGRNNHKLEAWRSALSEVGKIYGQRCDQKTAWGEAIDNIVEEVTKRLPPLPLYIDRPLGCDSELEEAKSLLEIGSHVTCFMLGIHGDGDEISKFVAELYNKIRPHFVTASFLSNISEKTNESGGGLEHLQETLLSEMGEEVRTKIGSTFKGSSEIKQRLGRKRVLLVLDDVDSIQQLDSLARRTDWFGPGSRIIITTRYEDVLDDHILNNGVEVKKYCIAEGSSSTVKEENVVGLEKDFEIVINQLKEEDSPGNVVSIVGMGGLGKTTLARKIYNSDEVKMLFPCRAWATVSKDYSGKEVFKSLLKCLKPSASKFEDSSSEEELKQKVKKCLKGKKYLVVLDDVWDSKAWRTIKNCFPENNNGGMILVTTRNDQVAYVSESKKPHHKLSFMDKERSWELFHKEVFCRRNCPPELESIGRSIVETCKGLPLAIKTTAGLVAKRERSEDAWEEIMNLLPYWSVADEDSSEEMMELLKFSYDDLPNKMKPCFLYLGVFPEDEEIWVRDLIRLWIAEGFIEPIQTGRSKSPPQLEDIGEQYLKELVDRNLVQVANRRSDGKGVKTCQIHDLFRELCISESNKPDNNIKSAGRLSFPGDIGSYSCLVTCNQSCTCSLFVYDGTREWPHYIPEDCRVNVIYFAYGYTYLNEYLKELESLKFLKMFLCESYELCKLQSLKTCHVMIFKKDLSIGRLKQLRHLRCGTELNLSVDEEVVKDKMQNLQTLCYVSADSQLGSLLDNGCFPNLRKLGVSINKDQGSADENLRSLYCLNNLRKLVLIFGDGCVTLDRIAFPSNITKISLSSFKDLKSKDMNTLGQIPSLQILKLIYGSCEEETLNCGAAGSFLRLQLFIMDSVDITCLTSEEGVMPRLRRAVFYNCPDLKEVTKQMRSLGSNLEFIEYDVNHRLSLGGSNL* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2900 1043 Gene3D - 348 520 IPR027417 -
Ahy4g2900 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 346 IPR027417 -
Ahy4g2900 1043 PANTHER DISEASE RESISTANCE PROTEIN RP 361 1019 IPR044974 GO:0006952
Ahy4g2900 1043 Gene3D Ribonuclease Inhibitor 767 1038 IPR032675 -
Ahy4g2900 1043 Gene3D - 181 344 IPR027417 -
Ahy4g2900 1043 Gene3D - 16 180 IPR035897 -
Ahy4g2900 1043 Pfam NB-ARC domain 371 615 IPR002182 GO:0043531
Ahy4g2900 1043 Pfam NB-ARC domain 262 341 IPR002182 GO:0043531
Ahy4g2900 1043 PANTHER - 361 1019 - -
Ahy4g2900 1043 SUPERFAMILY L domain-like 699 1033 - -
Ahy4g2900 1043 PRINTS Disease resistance protein signature 390 405 - -
Ahy4g2900 1043 PRINTS Disease resistance protein signature 783 799 - -
Ahy4g2900 1043 PRINTS Disease resistance protein signature 560 574 - -
Ahy4g2900 1043 PRINTS Disease resistance protein signature 466 480 - -
Ahy4g2900 1043 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Ahy4g2900 1043 Gene3D - 526 617 IPR042197 -
Ahy4g2900 1043 Pfam TIR domain 17 180 IPR000157 GO:0007165
Ahy4g2900 1043 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Ahy4g2900 1043 Gene3D - 618 708 IPR036388 -
Ahy4g2900 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 627 IPR027417 -
Ahy4g2900 1043 SMART till_3 17 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2900 Ahy-Chr4 127032510 127036745 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2900 65 338 WRKY Transcription Factor Family AT4G12020 29.242 4.10e-18 88.6