Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2895 ATGGCCAATGATGGAGCGGCCGGGTCATCATCCTCGTCGACGCCGTGGAGGTGGGCATCGTCATCCTTGTCAGAAGAAGGAATGTATGATGTTTTTCTGAACTTTAGAGGCGAAGACACAAGGTTTGCATTCACAGATTATCTCCACTATGCACTCTCCGAAATCGGAAAGCTCAAAGTATTCAGGGATGATCCGGGTCTGGAACTAGGTGACGAAATTAAATATACTCTGATGGAAGCCATTAAAAGATCCAGGATTCAAATTGTTGTGATGAGTGAAAACTATGTATCTTCCGGATGGTGCCTCCTGGAACTAGAGCAGATGCTCAAGTACTCCGATGATGGAAACAAACGGTCCATAATCCCAGTATTTTATCGCGTGAAGCCTGCAGAAGTGAATCGTCAGAGTAGCGACAAATCCAAGGAAGCCATGAAGAAACACCAAGAGAGATACGGCAAACACAAGGCGGAGGCCTGGAAGTATGAAACTCAGGTCATTGGTGAGATTGCTGAACAAGTCTTTGCAAAACATCGAAAGATCAAGCAACTATTGGATAAATTTGATTCTGAATTTGAAGCGGTCGAACCACTTTTGAACCTTGAATCTTGTGATACTGTTCGTATGGTGGGAATTTATGAAGATCCTAAAATAGGCAAAAGTTACATAACAACATTTGCATTTGAGCTATACTATAAGATCAAATACAAGTTCAGAGCGGCAAGTTTTCTTGTTGATGTTAGTAAACAGTTAAGGAAAAACACCGCTAATGGCTTGGAAAATCTCCACAAGGAGCTTCTTTCTGATATGGGTGTGGAAACCATGCAGGAGTTGCAACATAAGAGAGTGCTTCTGGTTCTGGAAGGGGTTAACAGTGACAAGCATTTGGAGTTTCTAGTGGGAATGGGAATAGGTGATTGGTTTGGTCTTGGTAGTAGGATCATCATAACAACAGAAAACAAAGATCTCTTTCAGAATTATCCTGTGATGGATGGTGTTGAGCTTAAGATACATTGCTTTCGCGAAGGTGAATTCAGTGGCAGTAATAGGAATGTGAAGGAAAGGAATGTTGTGAAAGATTTCATCGATTTAATTAATCAACTGAGAGAAGAAAATTCAATGAGGAACAATGTTGTTTCAATTGTCAGTGAGATATTCACTTCCCGTGCATTGGCAACTGTTTCCAAAGATTATAGAGAAAAAGATGTTTTCTCAAGCCTTCATCGTTCTTTGATGCCATCCACAGCTATACCTGAAAATGAAGAGGCTTTACAGGGGAATGTGAGAAGGGCACTTCTAGTATGGCCACACATATAG 1314 0.4125 MANDGAAGSSSSSTPWRWASSSLSEEGMYDVFLNFRGEDTRFAFTDYLHYALSEIGKLKVFRDDPGLELGDEIKYTLMEAIKRSRIQIVVMSENYVSSGWCLLELEQMLKYSDDGNKRSIIPVFYRVKPAEVNRQSSDKSKEAMKKHQERYGKHKAEAWKYETQVIGEIAEQVFAKHRKIKQLLDKFDSEFEAVEPLLNLESCDTVRMVGIYEDPKIGKSYITTFAFELYYKIKYKFRAASFLVDVSKQLRKNTANGLENLHKELLSDMGVETMQELQHKRVLLVLEGVNSDKHLEFLVGMGIGDWFGLGSRIIITTENKDLFQNYPVMDGVELKIHCFREGEFSGSNRNVKERNVVKDFIDLINQLREENSMRNNVVSIVSEIFTSRALATVSKDYREKDVFSSLHRSLMPSTAIPENEEALQGNVRRALLVWPHI* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2895 437 Pfam TIR domain 29 186 IPR000157 GO:0007165
Ahy4g2895 437 PANTHER TMV RESISTANCE PROTEIN N-LIKE 17 172 - -
Ahy4g2895 437 PANTHER TOLL/INTERLEUKIN-LIKE RECEPTOR-PROTEIN 17 172 - -
Ahy4g2895 437 Gene3D - 168 329 IPR027417 -
Ahy4g2895 437 SMART till_3 28 169 IPR000157 GO:0007165
Ahy4g2895 437 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 139 IPR035897 -
Ahy4g2895 437 ProSiteProfiles TIR domain profile. 27 177 IPR000157 GO:0007165
Ahy4g2895 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 331 IPR027417 -
Ahy4g2895 437 Gene3D - 3 165 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2895 Ahy-Chr4 127016291 127018741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2895 29 323 WRKY Transcription Factor Family AT4G12020 27.103 1.98e-17 83.6