Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2891 ATGGCAGGTTCCTCATCATTATCAGATGAAGGTGCAGCATTATCATCACATTTCAAGTGTGATGTTTTTCTGAGCTTCAGAGGCCACACAAGACGCGAATTCACAGACGCACTCTATCATGCTTTGGTCAACAAAAGAATCGAGACTTTCAGAGATAGAGAGAATCTGAGAACAGGCGAGGAACTGGAAGGTGCTCTTGTTGAAGCAATTGAAAGATCAAGGATGTCAATTGTTATACTGTGTGATGAGTATCCAACTTCCAAGTGGTGCCTTGATGAACTCGTCAAGATCATGGAGTGTTCCCACAACGGAACAAAGCGACCGGTGTTACCAGTTTATTACTATGTGGAAGAATCAGATGTGCAACCTTGGGGTGTGATTATTGACAACATTGTTGAAGAGGTCTCAAGGAGACTTCCTTCTATTCCTTTATATATTGATCGCCCACTTGGATTAGATTCTCAGCTTGAAGAGGCGAAATCACTTCTAGAGGTTGATTCTCATGCTGCCTGTTTCATGCTGGGAATTCATGGAGATGGTGAACTAAGAAAATTTGTTTTGGAGCTATATAATGAGATTAGAGGTCATTTTAAAGCTGGAAGTTTTCTTTCTAATGTTAGTGAAAAAACAAAAAGAGGTGGCCTAGAAGGTCTGCAAAAAACACTTTTATCTGAGATGGGAGAGGAAGTGAAGACTGAGATAGGAAGCATATCCAGAGGATCCTCTGAAATTAGACAAAGGCTTGGCCAAAAGAGAGTTCTTCTAGTTTTGGATGATGTTGATAGCATACAACCATTGGAATCATTAGCAGGGGCAGGTGATTGGTTTGGTCCTGGTAGTAGGATCATTACAACAAGAAGAAATGATGGTGTACTAGATAAGCATGCATTAAAAAAGGGTGTTGAGATTAAGAAATTTTGCTTCGATGAAGGTGAATTCGAAGGCATGCAATCAGATGACAAACAAAAGAGGTATGTTGTGTAA 984 0.4024 MAGSSSLSDEGAALSSHFKCDVFLSFRGHTRREFTDALYHALVNKRIETFRDRENLRTGEELEGALVEAIERSRMSIVILCDEYPTSKWCLDELVKIMECSHNGTKRPVLPVYYYVEESDVQPWGVIIDNIVEEVSRRLPSIPLYIDRPLGLDSQLEEAKSLLEVDSHAACFMLGIHGDGELRKFVLELYNEIRGHFKAGSFLSNVSEKTKRGGLEGLQKTLLSEMGEEVKTEIGSISRGSSEIRQRLGQKRVLLVLDDVDSIQPLESLAGAGDWFGPGSRIITTRRNDGVLDKHALKKGVEIKKFCFDEGEFEGMQSDDKQKRYVV* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2891 327 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 119 IPR044974 GO:0006952
Ahy4g2891 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 306 IPR027417 -
Ahy4g2891 327 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 125 IPR035897 -
Ahy4g2891 327 SMART till_3 19 166 IPR000157 GO:0007165
Ahy4g2891 327 Gene3D - 14 124 IPR035897 -
Ahy4g2891 327 ProSiteProfiles TIR domain profile. 18 139 IPR000157 GO:0007165
Ahy4g2891 327 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 24 119 - -
Ahy4g2891 327 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 124 295 IPR044974 GO:0006952
Ahy4g2891 327 Pfam NB-ARC domain 162 303 IPR002182 GO:0043531
Ahy4g2891 327 Gene3D - 125 302 IPR027417 -
Ahy4g2891 327 Pfam TIR domain 21 122 IPR000157 GO:0007165
Ahy4g2891 327 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 124 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2891 Ahy-Chr4 126978515 126981777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2891 67 292 WRKY Transcription Factor Family AT4G12020 26.236 8.35e-15 73.6