Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2887 ATGGCCGATGATGGAGCGGCCGGGGTGGCGTCTTCCTCGTTGCCGGCACCGTGGTTGTGGGCGACGTCATCCTTATCATCAGAAGGAGGCATGTATGATGTTTTTCTGAACTTTAGAGGCGAGGACACAAGGTTCTTATTCACAGATTATCTCTATCATGGCCTGGCCGATGTAAAAAAACTGCAAGTATTCAGGGATGATCCGGGTCTGGAACTAGGTGACGCAATTAAACCTACTCTGATGGAAGCCATTAAAAGATCTAGGATTCATATTGTTGTGATGAGTGAAAACTATGTGTCTTCTTCATGGTGCCTCCTGGAACTAGAGCAGATGCTCAAGTACTCCAACAATGGAACAAAACGTCCCGTTTTTCCAGTTTTTTATCGCGTGAAGCCTGCAGAAGTGAGATATCAGATTAGCACCAAATCTAAGGAAGCCATGAAGAAACATGAAGCAAGAGAAAACAAAGAGAAGGCGGATGCGTGGAAGTTGGCTTTATCTACAGTTTGCGGGTTAAGTGGAGAACACATTGTTGAGAAGGGAGATCATTATGAAACAGCGGTCGTAGGCAAGATTGCTGAACAAGTCTCTGCAAAACTTCTAGAGATCAGGCAACAATTAAACAGATTTGATTCTCAATTTGGAGTGGTTGAATCACTTTTGAACCTTGAATCTTGTGATACTGTCGGTGTGGTGGGAATTTATGAAGATCCTAAAATAGGCAAAAGTTACATAACAACATTTGCTTTTGAGCTATACTATAAGATCAAATATAAGTTCCAAACAGCAGCTTTTCTTGTTGATGTTAGTACACTTCTAAGGAAAACCACGGATGACAATCGCGTGGAAATTTTCCGACAGGAGCTTCTTTCTGATATGGTTGGGAAGAAGATGCATGAGTTGAAGCATGAAAAGATGCTCCTGGTTCTAGAAGGGGTTGATAGTAAAGAGCATTTGGAGTTGCTAGTGGGAATGAGAATGGGAATAGGTGATTGGTTTGGTGGTGGTAGTAGGATCATGATAGCTACAGAAAACAGAAATCTCTTTGAGGATTGTCCTGCTGTGATGAATGGTGTTAAGGTTGAGAAACATTGCATACGTGAAGGTGAATTCGGGAAGGAAAAGATTGTGAAGGAGAAGAAGGTAGTGGGATTTGTGAAAGAATTCATCGATGTTATTAATCAACTGAAGGAAGAAGATCCAAAGGGGAGGAATGTTGTTTCCATTGTTGGCATGGGTGGGTCGGGCAAGACAACCCTTGCTAAAAAGATCTATGATAGCAATGAGGTCAGCGAGGTATTCTCTTTCCGTGCATGGGTAACTGTTTCCAAAGATTACACGGAAAAGGAAATTTTCTCAACTCTTTTTCGTTCTCTGAAGCCATCCAAACCTATACCTGAAGAAGAAGGAAAGTTGAAGAAGGAGGTGAGAAGTTGTTTCACTAAGTTGAATGAGGAAAGTACAAAGTATTTGGTAGTGCTGGATGATGTGTGGGACACTCAACTGTGCCACAATCTAAAAGATTATCTTCTACCAAATAACAATAATGGCAGCAGGATATTGGTGACTACACGAAATCATGAAGTGGCAAACCGTGCAAGGTCCAAGGAACCTCACAGTAAACTGCTCCGGTTGAATGAAGAAGAAAGTTGGAGATTGTTTTGCAACGAGGTGTTTTGTGGAGAAGATTGTCCTCCTGATTTAGAGCCTATTGGTAAATCAATTGTAGAAAGTTGCAAGGGTTTACCATTGGCTATCATAACCATAGCTGGGGTTGTCGCAAAGAAGGAAGAAGAAGAGTGGGGAGACATTGAGAAACTAATTCCTCATTGGGATGTTGATGATGATATCATCCGGATGAAGAACATATTGAAGACAAGCTATGATGATTTACATGAAAATCTGAAGCCGTGCTTTCTGTATCTTGGGGTCTTTCCAGAAGATTACAATATAAATGTGACGGAATTAATCAGACTATGGATGGCAGAAGGCTTCATACAAGTAAGAGAAACTGGAACATCAAAGGCACCACCACAGCCTGAAGATGTTGGTAGGAAATACTTGAAGGATTTAGTGGATCGTAACTTGGTACAAGTGACAAAGAGAAAGAGTGACGGGAAAGGCGTGAAAACATGCCAGATCCACGATCTCTTCCGGGATCTGTGCATAGAACAGAGCAATGCACAGAGCATTCGTAGATTATCCTTTACTCGCAAGGGTAAATACTATGCTTGTTCAGTAATATGTAATCAATCGAGCATTTGTTCCTTGTTTGTTTATGGAATTGATGTGGATTGGTCAAGTGATACTCCGGAAAACTTACAATCAATTAATGTGCTACATTTTGAGACAGTTGGTGGTAAAGATCCAAGGGTGAATTTCAAGGAGTTGATCCACCTAAAGTACCTGAGAATATACAAACCGGTGGTACCCATAAGAATTGGGGAGTATAAGGAGCTGATGCATCTTAATTGTCGAGGTGGTGTGAAGCTACAAGCAGACAGAGAAGGACCAAATAACATATTACAAAATCTCCAAAGCCTAAGCTATGTGCGTCCTGATTCAGTACTAGAAAGCCTCATAAAGAATGGATGCTTTCCCAACTTGAACACATTGGGTTTGTTATTGTATTCAGAGGACAAGCAAGGAGGTAGGACTGAAGTACTAAAGAAACTGGGCGACCTAAGGAATCTACGCAACCTGAAATTACACTTTGATCACATGATGAAATATTACAATACGCCAGCACTTTTAATGGATGAAATGGAATTTCTGTCAAATCTCACCAAGATCACTTTGGAGGGTGCTTGGGGTTTCAACTCCAGCGACATGGCTGCTCTAGGACGGATTGCCAACCTCAAAACTTTAAAATTGAATGGGGGATTAGTATCGCCGAATAGGCTTATTAGTTGTGGTGATGCTGGGAGTTTTCCAAAGCTAGAAATGTTTCACATGATAGATATGTACTTTCTCCAATGTCTTGCACTAGAAGAAGGTGTGATGCCTTGTCTTCAACGCGTGGTCATCTCTCATTGCGGTGATTTGAGGGAGATTCCTGAACGGCTGTTGTCCTTGAGTAACTTACGCCATCTGCATGATGATATTTGGGAAGAAGCTGATAATGCCTCCAACAAGTATGAGCTCAGGAGAACTTCAACATCGTCATAG 3168 0.4157 MADDGAAGVASSSLPAPWLWATSSLSSEGGMYDVFLNFRGEDTRFLFTDYLYHGLADVKKLQVFRDDPGLELGDAIKPTLMEAIKRSRIHIVVMSENYVSSSWCLLELEQMLKYSNNGTKRPVFPVFYRVKPAEVRYQISTKSKEAMKKHEARENKEKADAWKLALSTVCGLSGEHIVEKGDHYETAVVGKIAEQVSAKLLEIRQQLNRFDSQFGVVESLLNLESCDTVGVVGIYEDPKIGKSYITTFAFELYYKIKYKFQTAAFLVDVSTLLRKTTDDNRVEIFRQELLSDMVGKKMHELKHEKMLLVLEGVDSKEHLELLVGMRMGIGDWFGGGSRIMIATENRNLFEDCPAVMNGVKVEKHCIREGEFGKEKIVKEKKVVGFVKEFIDVINQLKEEDPKGRNVVSIVGMGGSGKTTLAKKIYDSNEVSEVFSFRAWVTVSKDYTEKEIFSTLFRSLKPSKPIPEEEGKLKKEVRSCFTKLNEESTKYLVVLDDVWDTQLCHNLKDYLLPNNNNGSRILVTTRNHEVANRARSKEPHSKLLRLNEEESWRLFCNEVFCGEDCPPDLEPIGKSIVESCKGLPLAIITIAGVVAKKEEEEWGDIEKLIPHWDVDDDIIRMKNILKTSYDDLHENLKPCFLYLGVFPEDYNINVTELIRLWMAEGFIQVRETGTSKAPPQPEDVGRKYLKDLVDRNLVQVTKRKSDGKGVKTCQIHDLFRDLCIEQSNAQSIRRLSFTRKGKYYACSVICNQSSICSLFVYGIDVDWSSDTPENLQSINVLHFETVGGKDPRVNFKELIHLKYLRIYKPVVPIRIGEYKELMHLNCRGGVKLQADREGPNNILQNLQSLSYVRPDSVLESLIKNGCFPNLNTLGLLLYSEDKQGGRTEVLKKLGDLRNLRNLKLHFDHMMKYYNTPALLMDEMEFLSNLTKITLEGAWGFNSSDMAALGRIANLKTLKLNGGLVSPNRLISCGDAGSFPKLEMFHMIDMYFLQCLALEEGVMPCLQRVVISHCGDLREIPERLLSLSNLRHLHDDIWEEADNASNKYELRRTSTSS* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2887 1055 Gene3D - 198 363 IPR027417 -
Ahy4g2887 1055 PANTHER - 379 1034 - -
Ahy4g2887 1055 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 174 IPR035897 -
Ahy4g2887 1055 Gene3D - 544 627 IPR042197 -
Ahy4g2887 1055 Gene3D - 628 722 IPR036388 -
Ahy4g2887 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 642 IPR027417 -
Ahy4g2887 1055 Gene3D Ribonuclease Inhibitor 723 1037 IPR032675 -
Ahy4g2887 1055 SUPERFAMILY L domain-like 714 1032 - -
Ahy4g2887 1055 Pfam TIR domain 32 211 IPR000157 GO:0007165
Ahy4g2887 1055 PANTHER DISEASE RESISTANCE PROTEIN RP 379 1034 IPR044974 GO:0006952
Ahy4g2887 1055 SMART till_3 31 172 IPR000157 GO:0007165
Ahy4g2887 1055 Pfam NB-ARC domain 391 628 IPR002182 GO:0043531
Ahy4g2887 1055 Gene3D - 364 539 IPR027417 -
Ahy4g2887 1055 PRINTS Disease resistance protein signature 406 421 - -
Ahy4g2887 1055 PRINTS Disease resistance protein signature 484 498 - -
Ahy4g2887 1055 PRINTS Disease resistance protein signature 579 593 - -
Ahy4g2887 1055 ProSiteProfiles TIR domain profile. 30 200 IPR000157 GO:0007165
Ahy4g2887 1055 Gene3D - 30 197 IPR035897 -
Ahy4g2887 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 354 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2887 Ahy-Chr4 126958509 126962350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2887 81 352 WRKY Transcription Factor Family AT4G12020 26.042 2.02e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2887 - - aip:107637424 1118.61