Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2846 ATGTTTATGTCTTCTCTCCTTTGGAGCTGCATTGCAATGTGTGTTTCACTTGCACTTGCACTTCCACACCCTTCTTCTTCTTCTTCTTCACACCAACCTCTTAAGATTACTCGCTTACCAGGTCAACCCCATGTTGAGTTTCAACAGTTTTCAGGTTATGTTACTGTTGATAACAGCAACAACAAAGCACTTTTCTTCTACTTCGTTGAAGCTCAAAAGGATGCACCTTCCAAACCCCTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCTTCTATTGGAGTTGGTGCATTTTCTGAAAATGGACCATTTAGGCCAAAAGGAGAGGCCTTGGTGAGGAACCAATTCAGCTGGAACAGAGAAGCAAATGTTTTGTACTTGGAAACACCAATTGGAGTTGGATTCTCTTATTCAAAAGATACTTCCTCTTATGTGGGTGTAAATGACAAGATCACAGCCAGGGATAACTTAATATTCTTGCAAAACTGGTTTGTAAAGTTCCCACACTACAGAAACAGAAGTTTGTTCATAGTAGGAGAAAGCTATGCTGGCCACTATGTTCCTCAACTTGCTGAGCTTATGCTAGAATTCAACAGAAAAGAGAAGTTGTTCAATTTAAAAGGCATTGCTCTTGGCAACCCAGTTCTTGAATTCGAAGCAGATTTCAATTCAAGAGCTGAGTTCTTCTGGTCACATGGACTAATCTCAGATGTAACATTTCAAATGTTCACATCTGTGTGTAACTATTCAAGATATGTGAGGGAATATTATAGTGGAGCTGTTTCTCCTATGTGTTCAAGGGTTATGAGCCAAGTTAGCACAGAAACTAGTAGATTCGTCGACAAGTATGATGTTACACTTGATGTTTGTATATCTTCAGTGTTTTCACAAACCAAGGTCCTCAATCCTCAGCAAGTTACCGAAACCATAGACGTGTGCGTTGAAGATGAAACAGTGAATTATCTGAACAGGAAGGATGTTCAGTCGGCTTTGCATGCGCGACTGGTTGGAGTAACAAGATGGTCTGCTTGCAGCAATGTACTAGATTATGAGCTGCGCGATTTGGAGATACCAACAATCACAGTTGTTGGTAAATTAGTAAAGGCAGGAATACCAGTCTTGGTCTACAGTGGTGATCAAGATTCAGTTATACCATTGACTGGAAGTAGAAAATTAGTGCACCAATTGGCAAGAAAACTGAGGCTGAGAACCACTGTGCCATACAGGGTCTGGTTTGAGGGGGAGCAGGTGGGTGGCTGGACTCAAGTTTATGGTAATATCCTTTCATTTGCCACCATTAGAGGAGCATCACATGAAGCTCCATTTTCACAGCCTAAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAGGGTCGACCTCTACCTGAAGAATTTTAA 1398 0.4149 MFMSSLLWSCIAMCVSLALALPHPSSSSSSHQPLKITRLPGQPHVEFQQFSGYVTVDNSNNKALFFYFVEAQKDAPSKPLVLWLNGGPGCSSIGVGAFSENGPFRPKGEALVRNQFSWNREANVLYLETPIGVGFSYSKDTSSYVGVNDKITARDNLIFLQNWFVKFPHYRNRSLFIVGESYAGHYVPQLAELMLEFNRKEKLFNLKGIALGNPVLEFEADFNSRAEFFWSHGLISDVTFQMFTSVCNYSRYVREYYSGAVSPMCSRVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHARLVGVTRWSACSNVLDYELRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRKLVHQLARKLRLRTTVPYRVWFEGEQVGGWTQVYGNILSFATIRGASHEAPFSQPKRSLVLFKSFLEGRPLPEEF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2846 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Ahy4g2846 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Ahy4g2846 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Ahy4g2846 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Ahy4g2846 465 PANTHER CARBOXYPEPTIDASE 8 463 - -
Ahy4g2846 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Ahy4g2846 465 SUPERFAMILY alpha/beta-Hydrolases 37 462 IPR029058 -
Ahy4g2846 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 463 IPR001563 GO:0004185|GO:0006508
Ahy4g2846 465 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Ahy4g2846 465 Pfam Serine carboxypeptidase 41 458 IPR001563 GO:0004185|GO:0006508
Ahy4g2846 465 Gene3D - 360 458 - -
Ahy4g2846 465 Gene3D - 313 349 - -
Ahy4g2846 465 Gene3D alpha/beta hydrolase 32 292 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2846 Ahy-Chr4 126551663 126555096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2846 321 461 Calmodulin-binding Proteins AT2G22960 28.369 3.80e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2846 K16297 - gmx:100805130 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3211 14 140987193 140990626 Ahy4g2846 4 126551663 126555096 hybridization