Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2845 ATGCTCATTTTGGAGCTTCTAAGATTGAATTTTGGTTGTGCCTTTGTTTGTTCTGCTGAAATGGTTAAAAAAGGTAGCAACCCTTGTTCTCTTTCAAGGGTGTTTTTGGCATTCCTTCTTGTGTTCTTGTTCAGCTTGAGCAATAACACTGTTGAATGCCATGGAAGGTTGAGTATTAAGCATATCTCTTCTGAGTCTCCATCATCATCATCTAGGCCAACACCAACACCATCATCATCATCACTATACAAGGATGAACCTAAGAAGATTATTCTTAGTATAGTTTTAGGAGCAGTAACTGGACTAGTTGGTTCTGTAATCTTTGCATTTGTGGTTCGTTGTGTTGTTCAGTACCTTAACAGAACACCAATCCTCAAGGGTCCTGTCATATTCTCCCCAAAGATTGCCCCCAAGACGCTCCAATCGGCATTGGCGAAAGATAACCACTTGCTTGGTTCAAGTCCAAATGGGAAATACTACAAAACTGTTCTTGACAATGGCCTCACAGTTGCAGTCAAAAGGTTAACACCCTTTGAGAGCAATTCACCCGAGACTAAGAAAAAATCGGTCAAGAGGCAGATACAGAAGGAGCTTGAGCTTCTCGCTGGATTAAGGCACCGAAACTTGATGAGCTTGAGGGCTTATGTGAGGGAGCCTGATACATTCTTATTGGTTTATGATTATGTATCCACTGGTAACCTTGCTGATGTCATGAATAGAGTTAGGGAGAATGAGTTGCAGCTTAATTGGGAAGTTAGGCTTAAAATCGCAGTTGGTGTTGTGAAGGGTCTTCAGTATCTTCACAATTGTGTTCCTCAAGTTCTTCACAACAACTTGAAGCTCACAAATGTGATGCTGGATGCAGAGTTTGAACCAAAATTAGCAGATTATGGATTGGCTAAGCTTCTTCCAAACTTGGATAGAGGGACTAGTAGTCCTCCTGAATGTTTCCATAGTTGCAGCAGGTACACTGACAAAAGCGACATCTTCAGTTTCGGCATGATACTTGGTGTTTTACTAAGTGGAAAGGACCCTACAGATCCATTCTTTGGGGAGCCAGCAAGTATGGGAAGCATGGGGGGTTGGCTAAGGCACTTGCAGCAACAAGGCGATGCGAAAGAGGCTCTGGATAAGAGCATTCTTGGCGAAGAAGGCGAGGAAGACGAGATGCTAATGGCCGTGAGAATCGCCGCCGCATGCCTCTCTGATATGCCTGCAGAGAGGCCTTCTAGTGATGATCTTGTTCTCATGCTAACTCAACTCAACAGTTTTTAA 1275 0.4329 MLILELLRLNFGCAFVCSAEMVKKGSNPCSLSRVFLAFLLVFLFSLSNNTVECHGRLSIKHISSESPSSSSRPTPTPSSSSLYKDEPKKIILSIVLGAVTGLVGSVIFAFVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKDNHLLGSSPNGKYYKTVLDNGLTVAVKRLTPFESNSPETKKKSVKRQIQKELELLAGLRHRNLMSLRAYVREPDTFLLVYDYVSTGNLADVMNRVRENELQLNWEVRLKIAVGVVKGLQYLHNCVPQVLHNNLKLTNVMLDAEFEPKLADYGLAKLLPNLDRGTSSPPECFHSCSRYTDKSDIFSFGMILGVLLSGKDPTDPFFGEPASMGSMGGWLRHLQQQGDAKEALDKSILGEEGEEDEMLMAVRIAAACLSDMPAERPSSDDLVLMLTQLNSF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2845 424 Gene3D Phosphorylase Kinase; domain 1 135 228 - -
Ahy4g2845 424 SUPERFAMILY Protein kinase-like (PK-like) 149 418 IPR011009 -
Ahy4g2845 424 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 34 424 - -
Ahy4g2845 424 MobiDBLite consensus disorder prediction 62 82 - -
Ahy4g2845 424 Gene3D Transferase(Phosphotransferase) domain 1 229 423 - -
Ahy4g2845 424 PANTHER - 34 424 - -
Ahy4g2845 424 ProSiteProfiles Protein kinase domain profile. 145 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2845 424 Pfam Protein kinase domain 148 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2845 Ahy-Chr4 126546237 126549492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2845 60 421 Receptor kinase-like Gene Family AT2G31880 32.678 8.03e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Ahy4g2845 Pkinase 2.70E-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2845 - - vra:106759565 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3210 14 140981767 140985022 Ahy4g2845 4 126546237 126549492 hybridization