Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2841 ATGGATCCAAGAAGGCATGGGAAGCTACCATTATCTTCATCATCAGATGCAAAAGAGAAGAGAGAGGATGATGATTATGGATCTTCTTGGTGCACACCTGAAGACACTGACATGTCAACCATGGTTTCAGCTCTTGCTCAAGTTATGGCAACTTCCAATAATAATAATAATCAAAACCCTCATCACATGATGATGATGCCACAATCAAACCCTTTTCCTCTCTCAAATGAACCTCTTCAACCTACTCACCCTCTTCAAGATCAAGAGGAGGGGTCAAATAAGAAGAAGCCACACTACAGAGGAGTGAGACAGAGGCCATGGGGAAAATGGGCAGCAGAAATTAGAGATCCAAACAAAGCAGCAAGAGTCTGGCTTGGAACCTTTGACACTGCTGAAGATGCTGCTTTAGCTTATGACAAAGCTGCTCTCAAATTCAAAGGCAACAAAGCCAAGCTCAATTTCCCTCAAAAACTTGTTCAACCAAACACTACTCAACAACAACAACCTAATAACAACAACATGCTACAACAACAACAACTACAAGGTGGTTCTGCCTTTCAATTCAGTGGTTCAGCTTCTAATGCTATTCTTCCTACGCTCTATTCACCATCATCATCATTATCCTCAACACATGATCATCAAGTTTTCCCAAACTTGTTTCAGTATGCACAGATTCTTTCAAGTGATGAAGCAAATTTTCCTTATTACACTTCACATCTTTTCAATCAACAACAGCAACAACAGCAGCAACAATTGCAACAATCTTTGAATCCATCGTCCTATTTCTACAACCAACAACAACAACATGATCATGAAGGAGGACACCATCACCACCAAGATTAG 843 0.4045 MDPRRHGKLPLSSSSDAKEKREDDDYGSSWCTPEDTDMSTMVSALAQVMATSNNNNNQNPHHMMMMPQSNPFPLSNEPLQPTHPLQDQEEGSNKKKPHYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEDAALAYDKAALKFKGNKAKLNFPQKLVQPNTTQQQQPNNNNMLQQQQLQGGSAFQFSGSASNAILPTLYSPSSSLSSTHDHQVFPNLFQYAQILSSDEANFPYYTSHLFNQQQQQQQQQLQQSLNPSSYFYNQQQQHDHEGGHHHHQD* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2841 280 MobiDBLite consensus disorder prediction 1 35 - -
Ahy4g2841 280 SMART rav1_2 98 161 IPR001471 GO:0003700|GO:0006355
Ahy4g2841 280 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Ahy4g2841 280 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Ahy4g2841 280 ProSiteProfiles AP2/ERF domain profile. 98 155 IPR001471 GO:0003700|GO:0006355
Ahy4g2841 280 MobiDBLite consensus disorder prediction 1 28 - -
Ahy4g2841 280 CDD AP2 97 155 IPR001471 GO:0003700|GO:0006355
Ahy4g2841 280 Pfam AP2 domain 97 147 IPR001471 GO:0003700|GO:0006355
Ahy4g2841 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 50 271 - -
Ahy4g2841 280 PANTHER DNA-BINDING DOMAIN 50 271 IPR044808 GO:0003700|GO:0009873
Ahy4g2841 280 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
Ahy4g2841 280 MobiDBLite consensus disorder prediction 52 104 - -
Ahy4g2841 280 MobiDBLite consensus disorder prediction 52 87 - -
Ahy4g2841 280 Gene3D AP2/ERF domain 98 157 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2841 Ahy-Chr4 126496725 126500743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2841 37 158 AP2-EREBP Transcription Factor Family AT5G61890 56.250 6.75e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy4g2841 AP2 3.90E-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2841 - - gmx:100796624 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3206 14 140932255 140936273 Ahy4g2841 4 126496725 126500743 hybridization