Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2804 ATGTGTTCTTGCAGCTATGAAAGTGATGTTATCATGAATATTGTTGAAGAAGTCTCAGCAAAAGTTCCTCCTGAACCACTTTACATTAAGCATCCAATTGATTTTGGTTCTCAATTTGAAGTGGTGGAATCACTTTTGGACACTAAATCTCATGATACTCTCTGCATGCTGATTCTTTATGGAGATGTTGAAACAAAAAAAAGCACATTTGCAGGGGAGCTGTACAACAAGATAAAGCATCAATTTCAAGCTGCAAGTTTTCTTGATAAAGTACGTATAAAATCAAGGGGGATCCCCAATAGCCTAGAAAATCTCCAAGAGACACTTTTATCAGGTATGTGTGTGCATAAGAAACCAAGAATAGGCAGCACATTAAAAGGATCTTCTGACATAAAACAAAGTCTGCACAATAAAAGAGTTCTGCTGGTTCTAGATGACGTTGATAGTATAGAACAATTGGACTCACTTGCAGGAGGAAGTGATTGGTTTGGTCTTGGTAGTAGAATCATTATAACAACAAGAGATGTGAATGTGCTAGATAAGTATGAGTTGAATGGTGTTAAGGTTATGAAATATTGCATTGATGAAGGTGAATTTAAAAGCATGGAAGGTGCAAAATCAAATCACGAACAAGATAAGGACCTCCAGGAAGATATAGTGGGCTTTGTAGAGATCTTCAATGAAATAGTTGAGAAATTGAAGGAAAATGAGTCATGCACTGAAGTTGTCTCCATAATCGGCATGGGTGGGTTGGGTAAGACTACCCTTGCTCGAAAAATTTATAACAATAATAAGGTGAAAAAGTTATTCTCTTGTTGTGGATGGGTTACTATTTCTAAAGACTACAAAGCTAAGGACGTTCTCACAAGCCTTGTCAATGGTTGGGGATTGTCCAAGTCTACTACTGAATACAAAGTCTTAAGTGAGAAGGAACAAAAGAGCAAGGTCCAAGAACACTTGGACAGGAACAAGTATCTGATAGTGCTTGATGACTTATGGGAACCTGAAGTCTGGGATGAGGTAGAAAGTTTATTTCCAAATAACAAAAGTGGCAATACAATACTGATAACTAGTCGTAATGACGAGGTGGCAAATTATACAAGGTCAAAGTCCTACTACCCTCCATTCCTAGACAAAAATGAAAGCTGGAAACTTTTCTGCAAGGTGTTTGGGACACAACAGTGTCCTCCTGTTCTCGAACCCATCGGAAGAGAAATGGTGGAAAAATGTGGGTTTTTACCTTTAGCAATTGTGACCTTAGCTGGGATTGTCGTCAAGAAGAAGAGACTAACAGTTGAGTGGATGAGAATCATGCGCAATGTCATTTGGTATCTTGCTAAGGATAATAATGGAGTCATGAATGTGCTAAAGCTAAGCTATGATAACTTGCTTCAAAGATTGAAACCTTGTTTTCTATATTTTGCAGTGTTTCCAGAAGATTATAGAATTCCTGTGAAACAGTTGATTCAACTATGGATAGCCAAAGGATTAATCCAACCACCAAAATCTGGAACATCATCTGCAGGAAAACTAGAAGATATGGCTAAAGAATACCTGAATGAGCTGGTGGATCGTAGCTTCGTGTTGGTAGCGAGAAAAAGGAGTAATGGAAGTCTGTCAGTTTGCCGGATCCACGACCTTCTCCGTGATCTCTGCATATCGGAGAGTAAAGCTGATAACGAGTTTGAGATTTGCACAGAGAAAGACATACATTCCATGGACATGAAGAAATTTTGTAGATTGTCCCTTCGAAGCCCTGAGTTTGATGATTGGCGTTCTTTCACAAACCAATAA 1794 0.3852 MCSCSYESDVIMNIVEEVSAKVPPEPLYIKHPIDFGSQFEVVESLLDTKSHDTLCMLILYGDVETKKSTFAGELYNKIKHQFQAASFLDKVRIKSRGIPNSLENLQETLLSGMCVHKKPRIGSTLKGSSDIKQSLHNKRVLLVLDDVDSIEQLDSLAGGSDWFGLGSRIIITTRDVNVLDKYELNGVKVMKYCIDEGEFKSMEGAKSNHEQDKDLQEDIVGFVEIFNEIVEKLKENESCTEVVSIIGMGGLGKTTLARKIYNNNKVKKLFSCCGWVTISKDYKAKDVLTSLVNGWGLSKSTTEYKVLSEKEQKSKVQEHLDRNKYLIVLDDLWEPEVWDEVESLFPNNKSGNTILITSRNDEVANYTRSKSYYPPFLDKNESWKLFCKVFGTQQCPPVLEPIGREMVEKCGFLPLAIVTLAGIVVKKKRLTVEWMRIMRNVIWYLAKDNNGVMNVLKLSYDNLLQRLKPCFLYFAVFPEDYRIPVKQLIQLWIAKGLIQPPKSGTSSAGKLEDMAKEYLNELVDRSFVLVARKRSNGSLSVCRIHDLLRDLCISESKADNEFEICTEKDIHSMDMKKFCRLSLRSPEFDDWRSFTNQ* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2804 597 PANTHER - 206 576 - -
Ahy4g2804 597 Pfam NB-ARC domain 41 185 IPR002182 GO:0043531
Ahy4g2804 597 Pfam NB-ARC domain 227 462 IPR002182 GO:0043531
Ahy4g2804 597 Gene3D - 465 554 IPR036388 -
Ahy4g2804 597 Gene3D - 14 188 IPR027417 -
Ahy4g2804 597 PANTHER DISEASE RESISTANCE PROTEIN RP 206 576 IPR044974 GO:0006952
Ahy4g2804 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 187 IPR027417 -
Ahy4g2804 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 474 IPR027417 -
Ahy4g2804 597 PRINTS Disease resistance protein signature 242 257 - -
Ahy4g2804 597 PRINTS Disease resistance protein signature 319 333 - -
Ahy4g2804 597 PRINTS Disease resistance protein signature 410 424 - -
Ahy4g2804 597 Gene3D - 376 464 IPR042197 -
Ahy4g2804 597 Gene3D - 206 372 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2804 Ahy-Chr4 126167245 126169333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2804 42 187 WRKY Transcription Factor Family AT5G45050 29.730 1.59e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2804 - - ahf:112795437 1194.87