Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2789 ATGTTTCCTTCTAGTTTCGGTAGTTATAGCTCTTACCCTTGTTACCCTTCATCTTCTTCTTCTTCACCATACCCTCCTTTCCCTTTCTTTAACCCTGAAAACAATAATAATGGTGCTAATAATTCAAACAACAACAACAACACTTTCCTTCATGATCCAATTTCTAATAATGCTACTACTACTACTACTGTTATTCCTTACCATCATCATGCTCCAACAATCCCAGAAAGTGCACTGATGACGAATTTGGCAGTGGCTGATGCAATGTTCAAGCAAGAGTACTTCACTGCTGCTGCTGCTGGTGGTTCTTCACACCATCATCATCACCATTATGGCATGTCAAGTTTGATAACAAAGAGGCCAGCACCAAAGAAAGATAGGCACAGCAAGATTCACACTTCTCAGGGCTTGAGGGACAGAAGGGTGAGGCTTTCTATTGAGATTGCACGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGATAAGGCCAGCAACACTCTTGAGTGGCTCCTAACAAAGTCAAAGAGAGCAATTAAGGAGTTAGCTAGGAGCAAGAACAGTAGCAGTGGTAATAACAATGGTGGAGTTGCCAATAACAGCTTCTCTTCTTCCTCTTCTGATGGGGCTGATGATGATGAAGTTGACTCAGTCATCAACCAACAACAACTCACTGATAATATTGATGGTACTCATGAACAAGGGGGTGTGGATTCATTGGAGAGGAGGCTGAGAAGGGATCAACAGAAGGAGGAGGAATCAAGGGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTAGCAAGATGTGCAACAGTGAGAAGGTGCAAGACTTGAAGAAGAAAAGCCCTGCAATGGTAATGGAAGAAGATCCTCAGATTCTAATGCAGCATCAACAATTGAGGGCACCAATGATTCAACCTCTTGAGGAATCTTCAATGAGATCATCACCAAAGCTGTTTCAGCCTCATCATCTTGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGAAGTAGTGAAGTCCCCAGAGATGATTTCAATGTTATTGAGGAATCCATTGTGATAAGGAGAAAGTTGAAGCAATCTTTGATGTCTTCTTCTTCTTCTTCTTCCAATAATAATCACCATCAAAATCATAATGTTATCCCTAAAGAAGCAACAAACTTCAACAACAACAACAGTGACTACCACTGCTTTCCCAATTTATCATCACCAAATTGGGAAGCTAATGCTTCTGCTGCCACTAATAATGGCCGCTCCAATGTTTGCACAATATCAAGCATGAATCTGTCTACAAGGCTTCAGATCTTTGGAAAGTCTTGGGAAGAGTGCACCAATCCCCACCTATGA 1371 0.4223 MFPSSFGSYSSYPCYPSSSSSSPYPPFPFFNPENNNNGANNSNNNNNTFLHDPISNNATTTTTVIPYHHHAPTIPESALMTNLAVADAMFKQEYFTAAAAGGSSHHHHHHYGMSSLITKRPAPKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLLTKSKRAIKELARSKNSSSGNNNGGVANNSFSSSSSDGADDDEVDSVINQQQLTDNIDGTHEQGGVDSLERRLRRDQQKEEESRAKMKESREKARARARERTSSKMCNSEKVQDLKKKSPAMVMEEDPQILMQHQQLRAPMIQPLEESSMRSSPKLFQPHHLAAAGGGGGGGGSSEVPRDDFNVIEESIVIRRKLKQSLMSSSSSSSNNNHHQNHNVIPKEATNFNNNNSDYHCFPNLSSPNWEANASAATNNGRSNVCTISSMNLSTRLQIFGKSWEECTNPHL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2789 456 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 345 455 - -
Ahy4g2789 456 MobiDBLite consensus disorder prediction 183 291 - -
Ahy4g2789 456 Coils Coil 237 268 - -
Ahy4g2789 456 MobiDBLite consensus disorder prediction 235 291 - -
Ahy4g2789 456 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 307 IPR005333 GO:0003700
Ahy4g2789 456 Pfam TCP family transcription factor 123 279 IPR017887 -
Ahy4g2789 456 ProSiteProfiles TCP domain profile. 124 182 IPR017887 -
Ahy4g2789 456 MobiDBLite consensus disorder prediction 184 208 - -
Ahy4g2789 456 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 29 307 - -
Ahy4g2789 456 MobiDBLite consensus disorder prediction 118 137 - -
Ahy4g2789 456 MobiDBLite consensus disorder prediction 216 232 - -
Ahy4g2789 456 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 345 455 IPR005333 GO:0003700
Ahy4g2789 456 ProSiteProfiles R domain profile. 259 276 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2789 Ahy-Chr4 126017496 126020344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2789 120 286 TCP Transcription Factor Family AT1G67260 42.353 1.98e-29 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy4g2789 TCP 2.70E-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2789 - - aip:107637396 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3153 14 140464479 140467073 Ahy4g2789 4 126017496 126020344 hybridization