Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2786 ATGGGGTCAGCAGCGGTGGCCCAAAGCAACAATGATGGTTTTGTAAGTGATGAGATTAAAAAGTTAACTGAATTGCTGCATGATTTAACTCTTGAAGAAGACGACATTAAGGGAGAGTTAGAGTGGCTCAAGTCTGAGGGCAAGCAGAGCAAGACACAAGTTGATGATTGGTTGAATGAACTACAAGAATTGAGAAACGAAGTTGGTGATTGCTTGAATCTTGCTATGGGAGCAGTTCATTATTTCAATGAAAACTATCCACACTATCTTGGGCAAATGCAGCAATTAACTGCACAAGTGAGCGAGCTTAAGAAGAAAAAGCCTGTGGTGTTGTCAAATGAATTTGTTGGTAAAGATTTTGAGAAAAATGTTAAGAAGATGTGGGAGCTTGTTGGAGACGAGAAAGTATTGATGATTGGGATACATGGAATGGGAGGGGTGGGTAAAACATGTCTTGCAACTTACATGGAAACTCAAATCATAAGGAAAGGAACTTTCAACCACGTCATTTGGGTCACGGTGTCCCGTGATAATAGCATTTTGAAGCTTCAAGAAGATATCGCCAGAAGAATTGGTGCAAAGCTTAATGGTGATGATGATGAGAGAACAAGAGCAGCACATTTGTCATCCGCGTTATCAGAGAAAGGAAAATGGGTGCTTATTTTGGATGATGTTTGGAAATTCATTGATCTGGAAAAAGTGGGAATCCCTCGTTGTAGAATCAATGGTTCTAAATTGATTACAACAAGTCGGTTGAAACATGTGCTTCGACAGATGGATTGCCCCAGACTTAATATAATAACAATGGATCTTCTCTCTGACAGTGAAGGTTTGGAGTTATTTCTTGTAAAACTTGGTGAAGATCACAGAACACCTGCTAACTTACCATATAGATATAAGATATTTAAAATTGCAATGTTTATTGCACGGGAATGCAATGGTTTACCACTTGCAATCAGTGTAATGGCTAGAACCATGAAGGGGATTGATAGCATTCATCAGTGGAGACATGCGTTGAATAAACTTGAGAGGGGGGAGATGGGGGAAGAGATGAAAGAAGAGGTATTTCAAGTATTAAAACTGAGTTATGATAACCTGATGGACACTCGCTTGCAAAATAGTTTCTTGCATTGTGCATTATACTTTGAAATCCTTGACTATGATAACATGATAATGATGTTGGTTGACAGTGGAGCCATAAATGGAAGGAGGAGTTTGAACGACATTTTTGACGAAGGCCATACCATATTGAATGAACTTGAAGACCATTCATTATTGCTTCCCTTTAAGAATATGCAGAATTCGGTGAAAAATATGGCATGTCATATATCGAAAGAATCTCAAAGGTGCATAGTGAGATGTGGTAAAAAATTGATAGGAATACCCCACATGCAGGAATGGACTGCTGATTTGGAGTTAGTTTCTTTGGATACAAATGAGATAGAAGAAATCCCAGCGGGTATATCACCCAAGTGTCCAAGGTTATCCACCTTGATTATGAGTAATAATTGCATCAGTAGCATCCCAGAATGCTTCTTCACACACATGAGATCTCTAGCAATACTTGACCTATCTTTCTGTAGGTATTTAACATCTTTGCCGGAATCGCTGTCGGACTTATCTTGTCTTGTTTCTCTACTGCTTGATGCATGTAAAGCTTTGGCAAAGGTGCCTCCATTGGGAAGGCTTCAAAAATTGTCAAGGTTGGTAATTTCAGACACTCAAGTTGAGGTAGTTCCTGGCTTGGAAATGCTAACAAACTTGACATGGCTTGATCTATCTTACAATGAAAAGTTGAGGTTAGAATCAGGGAGGGTGCTGCGTGGTCTGACCAAATTGCAATATCTGGATCTCTTCAAAGCTGCTCTGCTAAATGTGGAAATAGAGGATGTACAAGGGCTGACCACACTTGAATATTTAGTGGCCGGCTTTAATGACTGCAAAAGCTATGACAATTATGTGGCAAGTATATGGAACACAGGTTCTGCACCCAAATCTTATCTTCTCTATTTGGGTAGTACCGCTAACTCTCAATGGATTTTTGATTCTAAATATGATACTGGTCCACGTTGTGACGACCACCAAATTGTACATTTATTAGATTGCGAAGAATCCCCTCATTTGCTGCCAAAAGATCTTACCAAAATCTTTATTGAACGTAATCCGCGTTGGAAAAGTTTATGTGATGCTCTGTCAAATATTACTCCTTCTTCTTTGGAGAACATTCAAATTGGGAGATGCACAGAAATGAAGAGCGTGCTTTGTTCATTTGGTAATTGTTCCTTTTGCAGTAATCTCAACAACCTTCAATCCTTGCAGCTTTACGCTTTGGAGAGCTTAACAGTCATTTGTAAAGAAGATGTTGCTGTTACTGATACAACAACACAGCCTCTCAAACCAAATGCCGTCTTCTCTCATCTCAGTCGCTTAGAGATCTCATCTTGCAATGGGATAGAAACGTTGGTAACAGCAGGGTTATTGCCCCAACTTCAAAACCTGCAGACATTAACTGTGGAGGGTTGTCGATCATTGAGAGAAATATTTGCAGCGAGTAGCAGTGGTGCTGATAGTGATGATGCTGCTTCCACCATCATTACACTCCCCAACTTAACCTCACTCTATTTGTGTGACTTGCCAATGTTAGAGACTCTGTGCAAAGGAATTATAATCTCCGAATCATTGCCGAAATTTGTGATCCGTGGGTGTCCCAACTTGCATGATTGGATTAAAGCTAACCTTTCTGCACACAACAACTGGCAATGCATTTTTGGTGTCGCTACATCCTCAATCTGGTTCTTCCGCAACAAGCTAATTTTCGAAAGTAAAGACAGTCATGCACCTTCAGTCCTAGCTCAAATTCGAACCCGAAGTGATGAGTTCAGCCGATTCACAAGGAATACGACTCAATTAAGCACCTATAGTGCCAAGCATGATCGTCCAATATGCTGGACTCCCCCTAGCGAAGGTGTTGTGAAACTAAATGTTGATGGCTCTCTTTTTGCGCATATAAATAATGCGGCATGTGGTGGAATTGTTAGGAACCATCTTGGAGGCTTCGTGAAAGGCTTCTCTTGTAACCTTGGAAGTTGCTCAATTATGCATGCTGAGCTTTGGGGTATAATCTATGGTCTTAAAATTGCCTCTAATCTTACTCAGTCTATTGTTATCATGGAATCTGATTCAACTGCTGCTCTGAAATTTATCTCTCATGGATGTCCTGCAGGCCACCCGTGCTCTTCCCTTGTTGAAGAAATTAAGATCCATGCAAATCGAATTCCTCAAATATATTGGAGTCATGTTCCTAGGGAAGCAAACTTTGCTGCTGATCATTTAGCAAAGAAAGGACAATACCTCCCATTTAGATTGCATACTTTTGATTCGACCCCTGCTGAGATTGCACACATTCTTGTCACTGATATAGCTGCTGCTCCCCTCTTTAGAGGACTGGTCTAG 3453 0.4043 MGSAAVAQSNNDGFVSDEIKKLTELLHDLTLEEDDIKGELEWLKSEGKQSKTQVDDWLNELQELRNEVGDCLNLAMGAVHYFNENYPHYLGQMQQLTAQVSELKKKKPVVLSNEFVGKDFEKNVKKMWELVGDEKVLMIGIHGMGGVGKTCLATYMETQIIRKGTFNHVIWVTVSRDNSILKLQEDIARRIGAKLNGDDDERTRAAHLSSALSEKGKWVLILDDVWKFIDLEKVGIPRCRINGSKLITTSRLKHVLRQMDCPRLNIITMDLLSDSEGLELFLVKLGEDHRTPANLPYRYKIFKIAMFIARECNGLPLAISVMARTMKGIDSIHQWRHALNKLERGEMGEEMKEEVFQVLKLSYDNLMDTRLQNSFLHCALYFEILDYDNMIMMLVDSGAINGRRSLNDIFDEGHTILNELEDHSLLLPFKNMQNSVKNMACHISKESQRCIVRCGKKLIGIPHMQEWTADLELVSLDTNEIEEIPAGISPKCPRLSTLIMSNNCISSIPECFFTHMRSLAILDLSFCRYLTSLPESLSDLSCLVSLLLDACKALAKVPPLGRLQKLSRLVISDTQVEVVPGLEMLTNLTWLDLSYNEKLRLESGRVLRGLTKLQYLDLFKAALLNVEIEDVQGLTTLEYLVAGFNDCKSYDNYVASIWNTGSAPKSYLLYLGSTANSQWIFDSKYDTGPRCDDHQIVHLLDCEESPHLLPKDLTKIFIERNPRWKSLCDALSNITPSSLENIQIGRCTEMKSVLCSFGNCSFCSNLNNLQSLQLYALESLTVICKEDVAVTDTTTQPLKPNAVFSHLSRLEISSCNGIETLVTAGLLPQLQNLQTLTVEGCRSLREIFAASSSGADSDDAASTIITLPNLTSLYLCDLPMLETLCKGIIISESLPKFVIRGCPNLHDWIKANLSAHNNWQCIFGVATSSIWFFRNKLIFESKDSHAPSVLAQIRTRSDEFSRFTRNTTQLSTYSAKHDRPICWTPPSEGVVKLNVDGSLFAHINNAACGGIVRNHLGGFVKGFSCNLGSCSIMHAELWGIIYGLKIASNLTQSIVIMESDSTAALKFISHGCPAGHPCSSLVEEIKIHANRIPQIYWSHVPREANFAADHLAKKGQYLPFRLHTFDSTPAEIAHILVTDIAAAPLFRGLV* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2786 1150 Gene3D Ribonuclease Inhibitor 763 919 IPR032675 -
Ahy4g2786 1150 Gene3D Ribonuclease Inhibitor 438 660 IPR032675 -
Ahy4g2786 1150 Gene3D - 271 367 IPR042197 -
Ahy4g2786 1150 PRINTS Disease resistance protein signature 312 326 - -
Ahy4g2786 1150 PRINTS Disease resistance protein signature 212 226 - -
Ahy4g2786 1150 PRINTS Disease resistance protein signature 514 530 - -
Ahy4g2786 1150 PRINTS Disease resistance protein signature 138 153 - -
Ahy4g2786 1150 Pfam Reverse transcriptase-like 994 1114 IPR002156 GO:0003676|GO:0004523
Ahy4g2786 1150 Gene3D - 989 1116 IPR036397 GO:0003676
Ahy4g2786 1150 PANTHER - 90 902 - -
Ahy4g2786 1150 SUPERFAMILY L domain-like 446 911 - -
Ahy4g2786 1150 CDD RNase_H_like 993 1113 IPR044730 -
Ahy4g2786 1150 Coils Coil 47 74 - -
Ahy4g2786 1150 Coils Coil 19 39 - -
Ahy4g2786 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 378 IPR027417 -
Ahy4g2786 1150 Pfam Leucine rich repeat 493 551 IPR001611 GO:0005515
Ahy4g2786 1150 Pfam NB-ARC domain 124 365 IPR002182 GO:0043531
Ahy4g2786 1150 Gene3D - 100 268 IPR027417 -
Ahy4g2786 1150 PANTHER DISEASE RESISTANCE PROTEIN RP 90 902 IPR044974 GO:0006952
Ahy4g2786 1150 SUPERFAMILY Ribonuclease H-like 990 1124 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2786 Ahy-Chr4 125979566 125988687 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2786 139 398 WRKY Transcription Factor Family AT5G45050 27.444 2.04e-07 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3150 14 140429264 140433654 Ahy4g2786 4 125979566 125988687 hybridization