Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2739 ATGGGGACTCCAAGTGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGTTCTTCTTCCATGTTCTGTTGCATTTTTCTTGTTTTTTAGCACTGCAACTGCTTTGCTTTCTCCCAAAGGAGTAAACTTTGAAGTTCAAGCTTTAATGGGGATAAAGAACTCACTGGTGGATCCTCATGGTGTTTTGGATAATTGGGATGCGGATGCTGTTGATCCTTGCAGCTGGACTATGGTTACTTGTTCTGCAGAGAACTTGGTGATTGGATTGGGTACTCCAAGTCAAAGTTTATCTGGTACTCTTTCTCCAACCATAGGAAACTTAACCAACCTTCAGATTGTGTTGCTTCAGAATAACAACATAACTGGACCAATCCCTTCAGAGTTGGGAAAACTTCCTAAGCTTCAAACTCTCGATCTCTCTAACAACTTCTTCAGTGGTGAAATTCCCCCTTCACTTGGCCACTTGAGAAGTTTGCAATACATGAGGCTCAATAATAACAGTCTTCATGGTGAATTGCCAGAATCATTGGCTAATATGACACAGCTTGCTTTTCTTGACTTGTCCTACAACAATATCAGTGGCCCTATACCAAGAATTTTAGCTAAATCCTTCAACATTGTTGGAAATCCCCTTGTTTGTGCAACTGGAAAAGAACCAAACTGCCATGGCTTGACACTGATGCCAATGTCCATGAACTTAAATGGCACTGAAGATGCCTTACCATCAAGCAAACCAAAATCTCATAAAATGGCAATTGCTTTTGGCTTGAGTCTCGGATGTCTCTGCCTCATAGTTCTCGGTTTCGGCCTTGTTCTTTGGTGGAGGCACAAGCACAATCAACAAGCATTCTTTGATGTGAAAGACCGGCATCACGAAGAAGTATACCTTGGAAACTTGAAGAGGTTCCAATTCAGAGAACTCCAAGTTGCTACCAATAACTTCAGCAGCAAGAACATTCTTGGAAAGGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCTCTGATAGCACTCTTGTAGCTGTCAAGAGGCTGAAAGATGGCAATGCCATTGGAGGAGAGATTCAGTTTCAGACTGAAGTCGAAATGATCAGCCTCGCCGTCCACCGGAACCTCCTCAGACTCTATGGATTCTGCATGACACCAACAGAAAGGCTCTTAGTTTACCCTTACATGTCCAATGGCAGCGTCGCTTCACGTCTAAAGGGTAAGCCGGTGTTGGATTGGGGAACAAGGAAGAACATTGCATTAGGAGCAGCAAGGGGGCTATTATATCTTCATGAGCAATGTGATCCAAAGATAATACATAGGGATGTGAAGGCTGCAAACATATTGCTTGATGACTATTGTGAAGCAGTGGTTGGTGATTTTGGGTTGGCAAAGCTTCTGGATCATCAAGATTCACATGTCACAACTGCAGTTAGAGGCACTGTAGGACACATAGCCCCAGAGTATCTATCTACAGGACAATCATCTGAGAAAACTGATGTGTTTGGATTTGGGATTCTCCTCTTGGAATTGATCACAGGACAAAGGGCACTAGAGTTTGGAAAAGCTGCTAACCAAAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCAGGAGAAGAAGCTAGAGTTGCTTGTGGACAAGGATCTTAAAGGGAACTATGACAGGATTGAGCTTGAGGAAATGGTTCAAGTAGCATTGTTATGTACTCAAAACCTTCCAGGGCATAGACCAAAGATGTCTGAAGTTGTAAGAATGCTTGAAGGTGATGGATTAGCAGAGAGATGA 1779 0.43 MGTPSGRGRGRGRGGGGVLLPCSVAFFLFFSTATALLSPKGVNFEVQALMGIKNSLVDPHGVLDNWDADAVDPCSWTMVTCSAENLVIGLGTPSQSLSGTLSPTIGNLTNLQIVLLQNNNITGPIPSELGKLPKLQTLDLSNNFFSGEIPPSLGHLRSLQYMRLNNNSLHGELPESLANMTQLAFLDLSYNNISGPIPRILAKSFNIVGNPLVCATGKEPNCHGLTLMPMSMNLNGTEDALPSSKPKSHKMAIAFGLSLGCLCLIVLGFGLVLWWRHKHNQQAFFDVKDRHHEEVYLGNLKRFQFRELQVATNNFSSKNILGKGGFGNVYKGVLSDSTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKNIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLELLVDKDLKGNYDRIELEEMVQVALLCTQNLPGHRPKMSEVVRMLEGDGLAER* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2739 592 SMART serkin_6 315 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2739 592 SUPERFAMILY L domain-like 45 207 - -
Ahy4g2739 592 Gene3D Ribonuclease Inhibitor 42 224 IPR032675 -
Ahy4g2739 592 Gene3D Transferase(Phosphotransferase) domain 1 392 591 - -
Ahy4g2739 592 Gene3D Phosphorylase Kinase; domain 1 284 391 - -
Ahy4g2739 592 Pfam Leucine Rich repeats (2 copies) 109 149 IPR025875 -
Ahy4g2739 592 SUPERFAMILY Protein kinase-like (PK-like) 292 585 IPR011009 -
Ahy4g2739 592 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 22 592 - -
Ahy4g2739 592 ProSiteProfiles Protein kinase domain profile. 315 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2739 592 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 22 592 - -
Ahy4g2739 592 Pfam Leucine rich repeat N-terminal domain 45 82 IPR013210 -
Ahy4g2739 592 Pfam Protein kinase domain 316 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2739 592 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Ahy4g2739 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2739 Ahy-Chr4 125422728 125426746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2739 22 592 Receptor kinase-like Gene Family AT5G16000 79.826 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy4g2739 Pkinase 4.80E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2739 - - gmx:100798412 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3101 14 139797454 139801494 Ahy4g2739 4 125422728 125426746 hybridization