Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2738 ATGTTGGACGAAGATACCAACGCCAACACCACCTCCTGGGCGCCGCGCGTGTGCGACACCTGCCGCTCTGCCCCATGTGCGGTCTTCTGCCGCGCTGACTCCGCGTATCTGTGCGCGTCATGCGACGCGCGCGTGCACGCGGCCAACACCTTGGCCTCGCGCCACGAGCGCGTGTGGGTATGCGAGGCCTGCGAACGCGCCCCGGCAGCGTTCCTTTGTAAGGCGGATGCAGCGTCGCTCTGTTCTTCCTGCGACGCTGACATCCACTCGGCTAACCCTCTGGCGAGTCGTCACCAGAGGGTGCCAATTGGACCTATGTACGGCCCACCATCCGTCCCAGTTACTGGGACGAATGGTGAGTTCGTTGGGATGGTTGAAGACGAAGAAGATGAAGATGATGACGAAGAAGAAGCTGCTTCTTGGTTGTTGTTGAACAACACCAACACCACGGCCGCCGTCACGGCCGGCACCAACAACAACCATAATAACAGTAACAGCAGCAACAACAACCAGAATCACCATCATCACCAACAACAGAGTAATAATAATGGTTTCTTGTTTGGTGGTGAGGTTGACGAGTATTTGGACCTTGTGGATTGTAATTCTTGTGGTGATGACGATAACAATCATCATCACAGCAACAATAACAATAACCACTTTGCGGTTGATGGTGTTGATCATCGTTATGGTTATCAGCAGCAGTATGGTGGAGGTGGCGGTGGTCAGAAGAGCTATGGTGGTGGCGGCGGCGGAGATAGTGTGGTGCCGGTTCAGCATTTTCAACTTGGTTTGGAGTTTGAGCCTTCCAAAGCTGGCTACAATTACAATGCTTCTATTAGTCAAAGTGTATCAGTTTCATCAATGGAAGTTGGAGTAGTGCCAGAATCATCAATCAGCAATGGATCAATTTGCCATTCAAGACCACCAAAGGGAACAATTGACCTATTTTCAGGACCTACCCCAATGCAAATGAGTTCACATCTCACTCCAATGGACAGAGAAGCCAGAGTCCTAAGGTATAGAGAGAAGAAGAAGACAAGAAAATTCGAGAAGACCATAAGGTATGCATCAAGAAAGGCCTATGCAGAGACTCGGCCGCGAATCAAAGGTCGATTCGCCAAGAGAACAGATGTTGAAGCTGAAGTTGATCAGATGTTCTCCACACCATTGATTACAGAAGTTGGTTATGGCATTGTTCCTTCATTCTGA 1209 0.5029 MLDEDTNANTTSWAPRVCDTCRSAPCAVFCRADSAYLCASCDARVHAANTLASRHERVWVCEACERAPAAFLCKADAASLCSSCDADIHSANPLASRHQRVPIGPMYGPPSVPVTGTNGEFVGMVEDEEDEDDDEEEAASWLLLNNTNTTAAVTAGTNNNHNNSNSSNNNQNHHHHQQQSNNNGFLFGGEVDEYLDLVDCNSCGDDDNNHHHSNNNNNHFAVDGVDHRYGYQQQYGGGGGGQKSYGGGGGGDSVVPVQHFQLGLEFEPSKAGYNYNASISQSVSVSSMEVGVVPESSISNGSICHSRPPKGTIDLFSGPTPMQMSSHLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTPLITEVGYGIVPSF* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2738 402 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Ahy4g2738 402 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 13 402 - -
Ahy4g2738 402 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Ahy4g2738 402 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 13 402 IPR045281 GO:0009909
Ahy4g2738 402 MobiDBLite consensus disorder prediction 152 186 - -
Ahy4g2738 402 Pfam CCT motif 333 375 IPR010402 GO:0005515
Ahy4g2738 402 ProSiteProfiles CCT domain profile. 333 375 IPR010402 GO:0005515
Ahy4g2738 402 MobiDBLite consensus disorder prediction 230 250 - -
Ahy4g2738 402 Pfam B-box zinc finger 58 103 IPR000315 GO:0008270
Ahy4g2738 402 SMART bboxneu5 13 60 IPR000315 GO:0008270
Ahy4g2738 402 SMART bboxneu5 61 103 IPR000315 GO:0008270
Ahy4g2738 402 CDD Bbox1_BBX-like 17 60 - -
Ahy4g2738 402 MobiDBLite consensus disorder prediction 152 187 - -
Ahy4g2738 402 CDD Bbox1_BBX-like 60 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2738 Ahy-Chr4 125410364 125412755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2738 1 402 C2C2-CO-like Transcription Factor Family AT3G02380 50.718 5.35e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Ahy4g2738 zf-B_box 1.70E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2738 - - ahf:112744683 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3100 14 139785977 139788259 Ahy4g2738 4 125410364 125412755 hybridization