Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2731 ATGCAAGCCTTAAGGGATGAAATCACAGGCCTTGATAATAATTATTTTCTCCCTTCAGAAACATATAACTATACTACCTCCATGATCCAAAATACCAACAATACCCTTACCTCTTTTCAACCATACAATAACAACAACAACCAATTCTATAATGGCAACAATTTCCTTAATCAAATGTTTTTTCCACCAGAATTTATTCTTAGCAACAATAGTCCTACTCAATCATCATGCATAAGTAGCAACAACTCAACCTCTGATGAAGCAGACGAACAACAACAACAACAACAAAGTCTTATCCTGAACGAGAGGAAACACAGGAGGATGATATCGAACCGGGAATCGGCTCGCCGGTCCCGGATGAGAAAGCAAAAACACCTTGATGAGCTTTGGTCACAGGTTGTTTGGCTGAGGAATGAGAATCACCAATTATTGGACAAATTAAATAATGTTTCAGAGTCACATGATAAAGTTGTTCAAGAGAATGTTCAATTAAGAGAAGAGGCTTCAGAACTTCGCCAAATGCTTTGTGACATGCAGCTACATAGTCCAATTTGCCCTCCTCCTTTGAGTCCTTTTCATCATGATGATGATGAAGAAGAAGAAGAATATCTCAACTATGATGATGATTCCTCAAACCAATCCAACACCACAAGTTCTATGAACCTACTCGGATAA 675 0.3822 MQALRDEITGLDNNYFLPSETYNYTTSMIQNTNNTLTSFQPYNNNNNQFYNGNNFLNQMFFPPEFILSNNSPTQSSCISSNNSTSDEADEQQQQQQSLILNERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLLDKLNNVSESHDKVVQENVQLREEASELRQMLCDMQLHSPICPPPLSPFHHDDDEEEEEYLNYDDDSSNQSNTTSSMNLLG* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2731 224 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 6 212 IPR044521 -
Ahy4g2731 224 MobiDBLite consensus disorder prediction 187 224 - -
Ahy4g2731 224 MobiDBLite consensus disorder prediction 71 123 - -
Ahy4g2731 224 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 106 121 IPR004827 GO:0003700|GO:0006355
Ahy4g2731 224 PANTHER BZIP TRANSCRIPTION FACTOR 6 212 - -
Ahy4g2731 224 Gene3D - 101 156 - -
Ahy4g2731 224 MobiDBLite consensus disorder prediction 71 99 - -
Ahy4g2731 224 Pfam bZIP transcription factor 103 155 IPR004827 GO:0003700|GO:0006355
Ahy4g2731 224 Coils Coil 147 174 - -
Ahy4g2731 224 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 101 164 IPR004827 GO:0003700|GO:0006355
Ahy4g2731 224 SMART brlzneu 99 163 IPR004827 GO:0003700|GO:0006355
Ahy4g2731 224 SUPERFAMILY Leucine zipper domain 103 152 IPR046347 GO:0003700|GO:0006355
Ahy4g2731 224 MobiDBLite consensus disorder prediction 208 224 - -
Ahy4g2731 224 MobiDBLite consensus disorder prediction 100 123 - -
Ahy4g2731 224 CDD bZIP_plant_GBF1 104 155 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2731 Ahy-Chr4 125328492 125329358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2731 63 184 bZIP Transcription Factor Family AT3G30530 69.600 1.21e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy4g2731 bZIP_1 5.50E-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2731 - - adu:107486353 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3094 14 139706580 139707592 Ahy4g2731 4 125328492 125329358 hybridization
Ahy20g3036 20 141078215 141082660 Ahy4g2731 4 125328492 125329358 PCT
Ahy10g2473 10 114321551 114328810 Ahy4g2731 4 125328492 125329358 PCT
Ahy4g2731 4 125328492 125329358 Ahy20g3036 20 141078215 141082660 PCT
Ahy4g2731 4 125328492 125329358 Ahy10g2473 10 114321551 114328810 PCT