Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2719 ATGGATTTACTAAGTGGTCGCAAATCAAATGAGATTTTTGAAGGGCAAGTTCATGTGTACAAACACATGTATGCTTACTTAGATTCTATGTGCCTTAAATGGTGCATTGAGTTAGAAATACCAACCATAATCTACAACCATGAAAAACCCATCACCCTTCATGAATTGATCTCAATTTTACAAGTTCCACCATCCAAAATTAGTGGTGTGGAGCGTCTTATGCGCCACCTAAGTCACAATGGATTCTTTGATATTGTAACAATCCATGATGATGATGGTGGTGATGAAAACAAAGAAAAAAAAGAAGCATATGCTCTCACTATTGCTTCTGAGCTTCTTGTTAAAGGCACTGAATATTGTTTAACTCCAATGGCTAAGTGTGGTCTTAATCCCCTTATGTCAAGTTCTTTTAACTTATTAGGAAAATGGACTTTAGAAAAAAATCTTACTTTATCTGAAATTTCCCTTGGAACAAATCTTTGGGACTTTCTTAGCAAAAACCCTTCAATTTTGACTTCCTTTAATGAGTCAATGGCTAGTGACTCTCAAATGGTGAAGTTGGCATTGAAAGATCATAGTGCTGTTTTTGAAGGGTTGGAATCCATTGTAGATGTTGGTGGTGGAAATGGAACCATATCTAAGATTATTAGTGACATGTTTCCCAAATTGAAGTGCATAGTGTTTGACCTTCCACATGTTGTGGAGAATTTTTCAGGAACCACCAGCAACAATTTGAGCTTTTGGATTCTACATGATTGGGATGAAGAACATTGTGTAAAGATACTGAAGAAATGCAAAGATGCAATTTCAAATAATACTAAAGGAGGAAAAGCAATTGTCATAGATCTTGTGATAAATGAAAAACAAGATGAATTTGGACTTACTCAAATGAAGCTCAGAATGGATATTGCCATGACAACTTTGAATGGAAAGGAGAGAAGTGAAGAGGAATTCAAGAAGCTTTTTTTGGAAGCAGGCTTTTAA 984 0.3547 MDLLSGRKSNEIFEGQVHVYKHMYAYLDSMCLKWCIELEIPTIIYNHEKPITLHELISILQVPPSKISGVERLMRHLSHNGFFDIVTIHDDDGGDENKEKKEAYALTIASELLVKGTEYCLTPMAKCGLNPLMSSSFNLLGKWTLEKNLTLSEISLGTNLWDFLSKNPSILTSFNESMASDSQMVKLALKDHSAVFEGLESIVDVGGGNGTISKIISDMFPKLKCIVFDLPHVVENFSGTTSNNLSFWILHDWDEEHCVKILKKCKDAISNNTKGGKAIVIDLVINEKQDEFGLTQMKLRMDIAMTTLNGKERSEEEFKKLFLEAGF* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2719 327 PANTHER O-METHYLTRANSFERASE 4 240 IPR016461 GO:0008168
Ahy4g2719 327 PANTHER O-METHYLTRANSFERASE 247 327 IPR016461 GO:0008168
Ahy4g2719 327 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 327 IPR016461 GO:0008168
Ahy4g2719 327 PIRSF O-mtase 1 247 IPR016461 GO:0008168
Ahy4g2719 327 PIRSF O-mtase 242 327 IPR016461 GO:0008168
Ahy4g2719 327 Gene3D - 5 113 IPR036388 -
Ahy4g2719 327 Pfam O-methyltransferase domain 154 236 IPR001077 GO:0008171
Ahy4g2719 327 Pfam O-methyltransferase domain 248 327 IPR001077 GO:0008171
Ahy4g2719 327 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 240 - -
Ahy4g2719 327 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Ahy4g2719 327 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 247 327 - -
Ahy4g2719 327 SUPERFAMILY "Winged helix" DNA-binding domain 9 116 IPR036390 -
Ahy4g2719 327 Gene3D Vaccinia Virus protein VP39 246 327 IPR029063 -
Ahy4g2719 327 Gene3D Vaccinia Virus protein VP39 114 245 IPR029063 -
Ahy4g2719 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 327 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2719 Ahy-Chr4 125194239 125196289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2719 30 327 Monolignol Biosynthesis Gene Families AT5G54160 29.193 1.88e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2719 K22588 K13262 gmx:100813225 392.504