Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2683 ATGAGGCTTGTCATAATAATACCTCTCTGTGTTATTGTTCTGTTCTCTTATGCAGCTGCATATGATCCTTTGGATCCAAATGGAAACATAACAATCAAATGGGATGTTATGTCTTGGACACCAGACGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTTCCGGCACATCCCGAATCCGGGATGGACCCTAGGATGGTCATGGGCAAAGAAAGAGGTTATATGGACCATGGTAGGAGCTCAAACAACAGAGCAAGGAGATTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCAACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAATCAGCAATACTCAAACTGCTGCAAGGGTGGAGTGGTTTCAGCATGGGGCCAAGATCCTTCGAGCGCTGTCTCCGCCTTCCAAGTCAGTGTTGGACAAGCTGGCACCTCCAACAAGACAGTTAAACTCCCCAAGAACTTCACTCTCTTGGCTCCAGGACCTGGCTATACCTGTGGCCCTGCCAAGGTTGTTCCCTCCACTGTTTTCCTTACACAAGATAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCGCAATTTCTGGCTAGAAAGAACCCGAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAAACCATTACTTCTTGTCCTACTTGTGCCTGTGGTTGCCAAAACAAGAAGAATTGTGTCAAGAGTGACTCGAAATTCCTCAACACACCCGGCGCTCACACTCCAAAGAGAGACAATGATCCATTGCTGCAGTGCACTCATCATATGTGTCCAATCAGGGTACACTGGCATGTGAAGCTCAACTACAAGGACTACTGGCGAGTCAAGATCGCCATAACGAACTTCAACTATAGAATGAACTACACCCTCTGGACTCTCGCCGTCCAGCATCCGAATCTCAACAATATCACCCAAGTTTTCAGTTTTGATTACAGGCCAATTCTTCCCTATGTGTCCATCAATGATACTGGTATGTTCTATGGCATGAAATTCTATAATGATCTATTAATGGAAGCTGGACCAAGTGGGAATGTTCAATCCGAAGTGCTTCTTCGAAAGGATCAGGATACCTTCACGTTCAAGCAAGGATGGGCGTTTCCTCGCAAGGTTTACTTCAATGGGGAAGAATGCATGCTTCCACCACCAGATACCTACCCATTCCTCCCCAATGCTGCTCCTGTAAAGCTACTTAACTTAACATCACTCATTTTCTTCTTGATTCTCTTGCTTGTAGCTTAG 1296 0.4545 MRLVIIIPLCVIVLFSYAAAYDPLDPNGNITIKWDVMSWTPDGYVAVVTMSNFQMFRHIPNPGWTLGWSWAKKEVIWTMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQYSNCCKGGVVSAWGQDPSSAVSAFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTQDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITSCPTCACGCQNKKNCVKSDSKFLNTPGAHTPKRDNDPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYTLWTLAVQHPNLNNITQVFSFDYRPILPYVSINDTGMFYGMKFYNDLLMEAGPSGNVQSEVLLRKDQDTFTFKQGWAFPRKVYFNGEECMLPPPDTYPFLPNAAPVKLLNLTSLIFFLILLLVA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2683 431 Pfam COBRA-like protein 44 207 IPR006918 GO:0010215|GO:0031225
Ahy4g2683 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
Ahy4g2683 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
Ahy4g2683 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2683 Ahy-Chr4 124828705 124831164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2683 9 430 COBRA Gene Family AT3G02210 65.138 0.0 611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3043 14 139187131 139189793 Ahy4g2683 4 124828705 124831164 hybridization
Ahy20g2708 20 137021110 137024060 Ahy4g2683 4 124828705 124831164 PCT
Ahy10g2193 10 110556753 110559859 Ahy4g2683 4 124828705 124831164 PCT
Ahy4g2683 4 124828705 124831164 Ahy20g2707 20 137017631 137020918 PCT
Ahy4g2683 4 124828705 124831164 Ahy10g2192 10 110553231 110556504 PCT