Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2633 ATGACTTCAAACAATGGGCGCAGCGCAAGTGAGAGCTTCAAAGCTCAAGCACTTGTTTATAGGCACATGTTTAGCATTCTAGACCCCATGTGTCTCAAGTGGATTATTGATTCTCGCATACCAAACATAATCCACGACCATGGAAAACCCATTACTCTTTCAGAATTGGTTTCCATTCTCAAAATTCCGTCAACTAAAGTTCATCGCATTGATGTTTTCATGCGCTACATGGCGTATATTGGATACTTTGATATCGTTAGAATCCATGATGGCAATCAAGAAGAAGAAAAGGAAGCATTTGCTCTCACAGCAGCATCAGAACTCTTGATCAAAGGCACTGAAAACCCTTGTATATCTCCATTGGTTGAGTTCGTTATGGATCCACTTATTTCAGATTCCTTTAATTATCTGAGCAAGTGGTTCTCCGACGAAGATCGCCGTCTATACGAGATCACCTTGGGGAAACCTTTGTGGGAGTTTCTTGACAAGAATCCAAGACTCTTGGGTTTGTTTAATGACGCTATGGCCGGTGATTCTCAGATGATAAAGTTGGCACTAAAGGATCACAACATGGTCTTTGAGGGGTTGGAAACAATTGTGGATGTTGGTGGTGGAATTGGAACCACCGCTCTAATTATCAGTGAGAAATTTCCAGCACTCAAATGTATAGTATTTGATCTTCCACAGGTTGTGAAAAATTTGAAGGGATCCAACAATTTGAGCTTTGTTGGTGGAGACATGTTTGAATCCATTCCTAAGGCTGATGCAATTCTACTTAAGCTAGTCTTACATAATTGGAGTGACGACAATTGCATAAAAATATTGAAAAACTGCAAAGATGCTGTTAAGGTTTCAAGCAAGGATAAAAAAGGTAAAATAATAATTTTAGAGACCGTGATAAATGAAGAACAAGATGAACCTGAAATTACTCGTCTCAAATTTCTTATGAGCATAAATATGCAAATTATTCACGGGAAAGAGAGAACCAAAGAAGAATGGAAAAATATCTTTTATGAAGCTGGCCTCTATAATTACAAGATATTTCCATTTACTGGATATTTATCACTTATAGAGATCTATTCTTAA 1086 0.3775 MTSNNGRSASESFKAQALVYRHMFSILDPMCLKWIIDSRIPNIIHDHGKPITLSELVSILKIPSTKVHRIDVFMRYMAYIGYFDIVRIHDGNQEEEKEAFALTAASELLIKGTENPCISPLVEFVMDPLISDSFNYLSKWFSDEDRRLYEITLGKPLWEFLDKNPRLLGLFNDAMAGDSQMIKLALKDHNMVFEGLETIVDVGGGIGTTALIISEKFPALKCIVFDLPQVVKNLKGSNNLSFVGGDMFESIPKADAILLKLVLHNWSDDNCIKILKNCKDAVKVSSKDKKGKIIILETVINEEQDEPEITRLKFLMSINMQIIHGKERTKEEWKNIFYEAGLYNYKIFPFTGYLSLIEIYS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2633 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
Ahy4g2633 361 PANTHER O-METHYLTRANSFERASE 3 360 IPR016461 GO:0008168
Ahy4g2633 361 CDD AdoMet_MTases 198 300 - -
Ahy4g2633 361 Pfam O-methyltransferase domain 134 341 IPR001077 GO:0008171
Ahy4g2633 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 359 IPR029063 -
Ahy4g2633 361 Gene3D Vaccinia Virus protein VP39 112 361 IPR029063 -
Ahy4g2633 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Ahy4g2633 361 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Ahy4g2633 361 Gene3D - 1 109 IPR036388 -
Ahy4g2633 361 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 3 360 - -
Ahy4g2633 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2633 Ahy-Chr4 124351721 124354842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2633 29 359 Monolignol Biosynthesis Gene Families AT5G54160 27.907 2.24e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2633 K22588 - ahf:112740688 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2991 14 138799963 138802443 Ahy4g2633 4 124351721 124354842 hybridization