Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2599 ATGAGAATTATGCTTATTACTGATCTTGATCATGGGAAATGCTTCCTAACGTGTTTTCTACATTTTGTTTTCGTCCTCCATAACCAAACCCCTTACCCCTATGCAATCGAAATTGAAATCCCTAATCATAACAAAATCCTTAGCATCATCATAGCCATAGCCATGGACTACACCACTTGGCCTGAATTTCAGCATGCCCAAGCCCAAACCCCAACACTACCCTCTTCACCTTCATTATATTCATACTCATACCCTCCTCTTCCATCTTCATCATCGTACACCGCCAATTTCGTCCCTTACCCTCAAAACCCTAACCCTCCTTCTTCAATTCCTCCCAACACTGTTTTAGAACCTGTGGTCAACCCTCCGGGTGTTGATTCCTATGTTCCCCCATTGCCATTGCCAACAACCCAAGCTGTTGGTGGTCATGAACAACTTCTTCCCCAAAATTACTCATACACCCAAACCCAAACCCAAATTGTGGGTACTGACCCTAATTCGTTGGTGGCTTCTTCTGGGTACTACTATGATCCCAATGCTCAAAATTGGGGTGATACTGCTGGAGGAGCTGTTATGCAATATGGTTCTGACCCTCTTGCTTATGGAGATATCTCTATGGCATCAAATGGCACAGAACAGTTGGCTGTTGCAAATACTAATCCCGCTGCATGGTGGACCAATACAGCTATGCAAGTTCAAACACAAGCGCAAGCACAAGCACAACCTCTTGGCAATAACAAATGGAAGCAGCTGCTGAAGAAGAAACCTAAAACTGTGAATGTTCAACCTGCATATTGCGAAGTTTGCAAGATAGATTGCACCAGCAAAGAGGTATTGGATCAACATAAATTAGGAAAGAAGCACAAGAAGAATGTAGAGAAACTAAGAGAATTATTAAGACCACCCCAGCCACAAGTCCATCCACCGGCCGATGGGTCATCTAATCCGGTTATAGGGCCACAATTGTGGAATAAGTGTAAGAGGAAATCAATTGAAACTCCAGAGGATTTGGAGAAAAAGAAGAAGAAAGTTCTGGAAGGAGGAGCAGCGGCCGCAGCAGTTAAAGTATGTTCTATATGTAATGTGGTATGTAATAGTGAAACAGTTTATAATTTCCACCTTCGCGGACAAAAGCATGCTGCCATGTTGAAGAAAGCATCTGAAAATATACTATCCAATGGAAAATGA 1188 0.4276 MRIMLITDLDHGKCFLTCFLHFVFVLHNQTPYPYAIEIEIPNHNKILSIIIAIAMDYTTWPEFQHAQAQTPTLPSSPSLYSYSYPPLPSSSSYTANFVPYPQNPNPPSSIPPNTVLEPVVNPPGVDSYVPPLPLPTTQAVGGHEQLLPQNYSYTQTQTQIVGTDPNSLVASSGYYYDPNAQNWGDTAGGAVMQYGSDPLAYGDISMASNGTEQLAVANTNPAAWWTNTAMQVQTQAQAQAQPLGNNKWKQLLKKKPKTVNVQPAYCEVCKIDCTSKEVLDQHKLGKKHKKNVEKLRELLRPPQPQVHPPADGSSNPVIGPQLWNKCKRKSIETPEDLEKKKKKVLEGGAAAAAVKVCSICNVVCNSETVYNFHLRGQKHAAMLKKASENILSNGK* 396
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2599 395 PANTHER ZINC FINGER RNA-BINDING PROTEIN 99 387 - -
Ahy4g2599 395 SMART ZnF_U1_5 261 295 IPR003604 GO:0003676|GO:0008270
Ahy4g2599 395 SMART ZnF_U1_5 352 386 IPR003604 GO:0003676|GO:0008270
Ahy4g2599 395 SMART c2h2final6 264 288 IPR013087 -
Ahy4g2599 395 SMART c2h2final6 355 379 IPR013087 -
Ahy4g2599 395 Gene3D Classic Zinc Finger 330 387 - -
Ahy4g2599 395 SUPERFAMILY beta-beta-alpha zinc fingers 260 296 IPR036236 -
Ahy4g2599 395 Pfam Zinc-finger of C2H2 type 356 379 - -
Ahy4g2599 395 Pfam Zinc-finger of C2H2 type 265 288 - -
Ahy4g2599 395 SUPERFAMILY beta-beta-alpha zinc fingers 354 385 IPR036236 -
Ahy4g2599 395 Gene3D Classic Zinc Finger 249 298 - -
Ahy4g2599 395 PANTHER - 99 387 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy4g2599 Ahy-Chr4 123975008 123976810 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2599 266 395 C2H2 Transcription Factor Family AT5G61190 30.405 7.13e-08 52.8
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2948 14 138214434 138216198 Ahy4g2599 4 123975008 123976810 hybridization