Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2589 ATGGGGTTGAAATTTACAAAGCAGGGGCCACAAAAAGTTGATGACTTGAGTTTACAGAATCACATGATCAATTACCTTACCAAGAATTTTATTCGAAACTTGGTATCTAAGCAACGGAGACGGATGCTCATTGCCGGCTATGATCTTGACATGACATATATCACAGATAGAATATTGGCAATGTCATTTCCTGCAGAACGAATGCGAGCAGTGTATCGAAATCCTCTATGGCAGGTGAAATCTGTGTTGGACATGACTCACCATGAACATTATAAGGCAGGGAAGGGTAGAACTGGCTTAATGGTGTGTTCATACCTAACTTATTCTGGCATGACAGCAGATGAGGCTCTTCAATTGTATGCAGAGAGAAGGACAACAAATAATGAAGGAGTATCAATACCAAGCCAACGCCGTTATGTAAGGTACTTTGAAAGTGTACTTTCTACCCCTAGGGGCAGAGTGAGCTTGCCTCAACCATGTAGCAGAGAATTGCGCCGAATTCGCCTTTATGATACAGTTAACATCTGTGCAATATTCTTTGTGATTTCAGAGCTGCAGGAGGAGGCTCCTAACCAGTGCTATCGACCGCCAGTGGAAATTTTCCGAGGGTGCTGCAGAGAGATTAAGAAAGGCTATCAGAGAACCAACAGTCCTCGCTACTATCTTTCTTATATCGAAGAAGAAAATGAAGATGGAACACAATCAGAACAAGAAGAACCTCGGATTGTTGTTCAAATGGACACAGAGAGTCCTGCAATATACAAGAAAACCTGTTTGGATTATTATTTCGACCAACCGATCCTATTAACTGGAGATGTACGTGTCATATTCTATGAGAAAATGATAGGAGGCCGTCTCTTCTATTGCTGTTTTAATACAGCTTTTGTTAAGAACAGCATGGTACAGCTGGGAATACAGGATTTGGACAAAGTTGGGAAGAAAGGAAGATCAATATGTGGAAGTGATTTTAGCTTGGAATTACTGTTTGGTCCTGCCAATTCATCAAGTGTATCCAATAGTGACAATGCTACTATTGTTTCCTTGTGA 1047 0.4107 MGLKFTKQGPQKVDDLSLQNHMINYLTKNFIRNLVSKQRRRMLIAGYDLDMTYITDRILAMSFPAERMRAVYRNPLWQVKSVLDMTHHEHYKAGKGRTGLMVCSYLTYSGMTADEALQLYAERRTTNNEGVSIPSQRRYVRYFESVLSTPRGRVSLPQPCSRELRRIRLYDTVNICAIFFVISELQEEAPNQCYRPPVEIFRGCCREIKKGYQRTNSPRYYLSYIEEENEDGTQSEQEEPRIVVQMDTESPAIYKKTCLDYYFDQPILLTGDVRVIFYEKMIGGRLFYCCFNTAFVKNSMVQLGIQDLDKVGKKGRSICGSDFSLELLFGPANSSSVSNSDNATIVSL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2589 348 Gene3D - 207 334 - -
Ahy4g2589 348 Gene3D Protein tyrosine phosphatase superfamily 26 91 IPR029021 -
Ahy4g2589 348 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 93 336 - -
Ahy4g2589 348 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 148 IPR029021 -
Ahy4g2589 348 Gene3D Protein tyrosine phosphatase superfamily 92 162 IPR029021 -
Ahy4g2589 348 ProSiteProfiles Phosphatase tensin-type domain profile. 40 150 IPR029023 -
Ahy4g2589 348 ProSiteProfiles C2 tensin-type domain profile. 176 332 IPR014020 -
Ahy4g2589 348 PANTHER BNAC03G16750D PROTEIN 1 92 - -
Ahy4g2589 348 Pfam C2 domain of PTEN tumour-suppressor protein 255 329 IPR014020 -
Ahy4g2589 348 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 220 331 IPR035892 -
Ahy4g2589 348 PANTHER BNAC03G16750D PROTEIN 93 336 - -
Ahy4g2589 348 SMART PTEN_C2_2 157 331 IPR014020 -
Ahy4g2589 348 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2589 Ahy-Chr4 123797228 123801093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2589 1 93 Protein tyrosine phosphatase (PTP) family AT5G39400 62.105 3.45e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2589 K01110 - jre:108987413 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2930 14 138043637 138047474 Ahy4g2589 4 123797228 123801093 hybridization