Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2569 ATGGATGGAGGCCGCGGTGCTACCGGTGTGGATATGTTTCTTCCAAATTATAAACTTGGAAAAACACTTGGCATTGGATCCTTTGGCAAGGTGAAAATTGCAGAACATGTATTGACCGGTCATAAAGTTGCCATTAAGATTCTTAACCGTAGGAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGACTGTTCATGCATCCTCACATTATTCGGCTTTACGAGGTTGTAGAAACTCCAACTGACATCTACGTTGTGATGGAATATGTGAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGCAGGTTGCCAGAGGATGAAGCCCGCAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGAAATATGGTGGTTCATAGAGACTTGAAGCCAGAGAATTTACTTTTGGACTCCAGGCGCAATGTCAAGATAGCAGATTTTGGCTTGAGCAACATCATGAGGGATGGTCACTTTCTTAAGACAAGCTGTGGAAGCCCTAACTATGCAGCTCCGGAGGTTATCTCTGGGAAATTGTATGCTGGACCTGAAGTAGATGTTTGGAGCTGTGGTGTAATTCTCTATGCCCTTCTTTGTGGCACCCTTCCTTTTGATGATGAAAACATACCTAATCTCTTCAAGAAAATAAAGGGCGGGATATACACTCTTCCTAGTCATCTCTCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTTGATCCTATGAAGAGGATGACCATACCTGAGATCCGTCAACACCCATGGTTCCAGGCTCGTCTTCCTCGTTATTTAGCTGTGCCACCACCAGATACAATGCAACAAGCAAAAAAGATTGATGAGGAGATCCTTCAGGAAGTAGTGAATATGGGATTTGACAGGAATCAGTTGGTTGAATCACTTCGCAACAGGATGCAAAATGAGGGTACTGTAGCATACTATTTGTTATTGGACAACAGATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGTCAATGGATTCTGGTTTTAACCAAATGCATCCCAGTGAAGTTGTTTCTCCAGTTCTTGGGCACCGCATTTCCAGCTATATGGATAACCCAGGTGTAGGATTGAGACCACAGTTGCCAGTTGAGAGAAAATGGGCACTTGGGCTTCAGTCTCGTGCCCACCCTCGTGAAATAATGACCGAGGTTCTCAAAGCCCTTCAAGAATTACATGTTTGTTGGAAGAAGATTGGGCACTACAACATGAAGTGCAGGTGGGTTGCTGGCATTCCTGGTAATCATGAAGGGATGGCTAACAATCACTACTTTGGAGATGATTCCAGCATTATTGAGAATGATGCTGTTTCTAATACCAATGTGGTCAAGTTTGAAGTGCAGCTTTACAAAACTCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGCTCCAAGGTCCACAGTTTCTCTTCTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTTCGTGTTCTCTAG 1524 0.4311 MDGGRGATGVDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLPEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSRRNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEEILQEVVNMGFDRNQLVESLRNRMQNEGTVAYYLLLDNRFRVSSGYLGAEFQESMDSGFNQMHPSEVVSPVLGHRISSYMDNPGVGLRPQLPVERKWALGLQSRAHPREIMTEVLKALQELHVCWKKIGHYNMKCRWVAGIPGNHEGMANNHYFGDDSSIIENDAVSNTNVVKFEVQLYKTREEKYLLDLQRLQGPQFLFLDLCAAFLAQLRVL* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2569 507 SMART serkin_6 17 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2569 507 PANTHER SERINE/THREONINE KINASE 7 506 - -
Ahy4g2569 507 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 458 506 IPR001772 -
Ahy4g2569 507 CDD STKc_AMPK_alpha 14 269 - -
Ahy4g2569 507 CDD UBA_SnRK1_plant 291 331 - -
Ahy4g2569 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Ahy4g2569 507 Pfam UBA/TS-N domain 291 327 IPR015940 -
Ahy4g2569 507 ProSiteProfiles Protein kinase domain profile. 17 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2569 507 SUPERFAMILY UBA-like 279 328 IPR009060 GO:0005515
Ahy4g2569 507 Gene3D Transferase(Phosphotransferase) domain 1 8 347 - -
Ahy4g2569 507 SUPERFAMILY KA1-like 326 506 IPR028375 -
Ahy4g2569 507 SMART uba_6 292 329 IPR015940 -
Ahy4g2569 507 Pfam Protein kinase domain 17 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2569 507 Pfam Kinase associated domain 1 464 506 IPR001772 -
Ahy4g2569 507 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Ahy4g2569 507 SUPERFAMILY Protein kinase-like (PK-like) 14 286 IPR011009 -
Ahy4g2569 507 Gene3D Kinase associated domain 1, KA1 393 505 - -
Ahy4g2569 507 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 7 506 - -
Ahy4g2569 507 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 290 330 IPR015940 -
Ahy4g2569 507 CDD AMPKA_C 387 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2569 Ahy-Chr4 123581541 123587307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2569 17 269 CBL-interacting serine-threonine protein kinases AT4G24400 52.756 1.01e-93 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Ahy4g2569 Pkinase 6.00E-81 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2569 K07198 - gmx:100796687 948.732