Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2562 ATGGGAAGATCACCATGTTGTGACAAAGTGGGTTTGAAGAAAGGACCATGGACACCAGAGGAAGATCAGAAGCTCTTAGCCTATATTGAAGAACATGGTCATGGAAGCTGGCGCGCTTTGCCAGCAAAAGCAGGGCTTGAAAGGTGTGGGAAGAGCTGCAGATTGAGATGGACAAATTATCTAAGGCCTGATATTAAGAGGGGAAAGTTCAGTTTGCAAGAAGAACAAGCCATCATTCAGCTTCATGCACTCTTAGGAAACAGGTGGTCAGCTATAGCCACACATTTGCCAAAGAGGACAGACAATGAGATAAAAAATTATTGGAACACACATCTCAAAAAAAGATTAACAAAAATGGGCATCGATCCTGTGACTCACAAGCCCAGAAACGATGCCCTAGTCTCTGGTGACGGCGGCCATTCAAAGAAGGTCGCCGCCAACCTCAGCCACATGGCTCAGTGGGAGAGTGCTAGGCTCGAAGCCGAAGCAAGGTTGGTTAGGGAATCAAAATTACGTTCATCACAACAACATTCATTGCAAATTCCAAATTCTATTACCACTTTTCCATCATCGTCTTCGTCTTCATCCTCAGCTCAAGCTATGATCAAATTAGCAGACGAATCTCCGATAACAACAACCAAAGATTGGACTAATAATGAAGATTGGTTATTGAGATCTAATCATGAAAGTAATGGTGGTGGTGGAATGGGAAATGCTGAACTTGAGTCACCAACATCTACATTATCATTCTCGGAGAACAACGCATCACCAGCAATAATTGGAGAAAATAGCAACAATAATAATGTTAATGTAGTGGTGCCTATGATTGAGTTTGTTGGAGCTACTTCAGGTTCATATTCTGAGAATGATGGAATTATTAGGAGTATAAACGTGAAGGAAGAAGGTAGTGAAGATCATGATCATCATCATCAACATGAGTGGAAAGACTATGATAATAATTCTTCAATGGGAACTTTCAACCCTAGCTTGCATGAATTGACAATGATGACCATGGAATCCACGTGGGGAAGTTCTTCTCATCATCATCAAAATCATGATCATGATGATGAATCTCTTAGGACAAGTGGTAGTAATGGTGCACATGTTAATGTTGGTGATGATGATGACGATGATGATATTGCTGAAGAAGAAGATGAAGAGTTAGGGTTCACAAATCTTCTGCTGAATGCTAATAATAATAACAACCCTAATCATGATAATAATGAATTAAGTTTGTCATCTGAAGGTGGTGGTGGTGATGGTAGTGGTGGTGGTGGTGGTGGTGGAGAGTCTCATAACAATGACAATGGTGATTCCTATGAAGATAAGAACTATTGGAACAGCATTCTCCATTTGGTGGATTCTTCACCTTCTGATTCACCAATCTTTTGA 1392 0.4073 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPRNDALVSGDGGHSKKVAANLSHMAQWESARLEAEARLVRESKLRSSQQHSLQIPNSITTFPSSSSSSSSAQAMIKLADESPITTTKDWTNNEDWLLRSNHESNGGGGMGNAELESPTSTLSFSENNASPAIIGENSNNNNVNVVVPMIEFVGATSGSYSENDGIIRSINVKEEGSEDHDHHHQHEWKDYDNNSSMGTFNPSLHELTMMTMESTWGSSSHHHQNHDHDDESLRTSGSNGAHVNVGDDDDDDDIAEEEDEELGFTNLLLNANNNNNPNHDNNELSLSSEGGGGDGSGGGGGGGESHNNDNGDSYEDKNYWNSILHLVDSSPSDSPIF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2562 463 MobiDBLite consensus disorder prediction 341 379 - -
Ahy4g2562 463 CDD SANT 69 112 IPR001005 -
Ahy4g2562 463 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy4g2562 463 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Ahy4g2562 463 MobiDBLite consensus disorder prediction 301 317 - -
Ahy4g2562 463 CDD SANT 16 61 IPR001005 -
Ahy4g2562 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy4g2562 463 MobiDBLite consensus disorder prediction 395 442 - -
Ahy4g2562 463 MobiDBLite consensus disorder prediction 301 328 - -
Ahy4g2562 463 MobiDBLite consensus disorder prediction 172 194 - -
Ahy4g2562 463 MobiDBLite consensus disorder prediction 395 415 - -
Ahy4g2562 463 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy4g2562 463 MobiDBLite consensus disorder prediction 224 250 - -
Ahy4g2562 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy4g2562 463 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 456 - -
Ahy4g2562 463 Gene3D - 69 116 - -
Ahy4g2562 463 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy4g2562 463 PANTHER TRANSCRIPTION FACTOR MYB106 1 456 - -
Ahy4g2562 463 Gene3D - 13 66 - -
Ahy4g2562 463 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy4g2562 463 SMART sant 13 63 IPR001005 -
Ahy4g2562 463 SMART sant 66 114 IPR001005 -
Ahy4g2562 463 MobiDBLite consensus disorder prediction 346 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2562 Ahy-Chr4 123540415 123543483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2562 1 260 MYB Transcription Factor Family AT3G01140 65.769 3.18e-110 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy4g2562 Myb_DNA-binding 2.20E-15 CL0123