Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2559 ATGGAATCAATGGAGAATGTTAGAATGCAAAGAGAGAAAGATCAGAAGTTCGAATTGCCGTCCGGCTTTCGATTTCATCCCACCGATGTAGAGCTCATAAATTACTACCTTGTTAAGAAGGTTCTTGATGATAAGCACTTCTGTTCTATAGCAATTGCTGATGCTGATATGAACAAGTCTGAGCCATGGGATTTACCCGGTTTAGCGAAAATGGGCGAAACAGAATGGTATTTTTTTAGTATGAAGGATAGAAAATACCCAACTGGCCAAAGGACTAATAGGGCGACCGAGGCCGGATATTGGAAGGCCACAGGCAAAGACAAGGAGATATCAAAGGAGAATTCAAAGATTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGAGCTCCAAGAGGTGAAAAGACTAATTGGGTCATGCATGAATATAGATTGGAAGGGAACAAATCTGTTTATAATCTGTCACAACCTGAAAGAGGTGAATGGGTTATATGCAGAGTATTTGAGAAGGGCAATAATGGAAAAAGACTGAATATTGCAAAGTTGGAGAGGCTCAACTCTTCGGGAAAGGAACCATTACCATTGCCAAAACCTACTCCTTTGATGCCTCCATTGATGGATTCTTCATCATCGAGAACCACCCCCGGCGAGTTATCTCAGGCGACGTGCTACTCCTCGGATCCAAATCAAGCCGATGTCCAGAACAATTTGCATGATGACATAGTTGAAAGCAGGGAAACTCCTATCTTGAACTTTTCCCCTGCTTCCATCAATGAAGAATTAATTCAGATTCCAAACCAAATTGAGAATCCGGATTATTATACTCTGCCTCAAGAAAACAACGGATCAATTGCAAGGCAGAATCAGAAATCAGAGTTTGATGCTGATATATCATCTTTGATTTACAACAATGACATGTTTTACAGGTTCTTTGGGAACCAAGAACATTCATCTTCAGCTTCCGCAGACATTTGCAACCTATGGAATTACTAG 993 0.4089 MESMENVRMQREKDQKFELPSGFRFHPTDVELINYYLVKKVLDDKHFCSIAIADADMNKSEPWDLPGLAKMGETEWYFFSMKDRKYPTGQRTNRATEAGYWKATGKDKEISKENSKIGMKKTLVFYKGRAPRGEKTNWVMHEYRLEGNKSVYNLSQPERGEWVICRVFEKGNNGKRLNIAKLERLNSSGKEPLPLPKPTPLMPPLMDSSSSRTTPGELSQATCYSSDPNQADVQNNLHDDIVESRETPILNFSPASINEELIQIPNQIENPDYYTLPQENNGSIARQNQKSEFDADISSLIYNNDMFYRFFGNQEHSSSASADICNLWNY* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2559 330 SUPERFAMILY NAC domain 15 170 IPR036093 GO:0003677|GO:0006355
Ahy4g2559 330 MobiDBLite consensus disorder prediction 204 233 - -
Ahy4g2559 330 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 3 323 - -
Ahy4g2559 330 ProSiteProfiles NAC domain profile. 19 170 IPR003441 GO:0003677|GO:0006355
Ahy4g2559 330 Gene3D NAC domain 28 175 IPR036093 GO:0003677|GO:0006355
Ahy4g2559 330 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Ahy4g2559 330 MobiDBLite consensus disorder prediction 187 233 - -
Ahy4g2559 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2559 Ahy-Chr4 123511603 123513317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2559 18 330 NAC Transcription Factor Family AT5G07680 45.593 3.40e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy4g2559 NAM 7.40E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2559 - - gmx:100782172 405.216