Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2536 ATGGAGGGGATGTTGAGCCTCAACACTGAAGCAAGTAATGATGCAAATCCCAAGCAACAATCCTCTTCTCTTGCAAATTTTGCAAAGAATTATCCTCCTAGCTTTCCTAGAAAGGTATTGGCAGAGATAATAGGGACATATTTATTGGTGTTTGTGGGAAGTGGTTCAGCTGGACTTAGTGCCATTGATGAAAACAAGGTATCAAAATTGGGAGCTTCACTTGCAGGAGGATTCATTGTAACGGTTATGATCTACTCCATTGGACACATCTCCGGGGCACATATGAATCCAGCTGTTTCCTTAGCTTTTGCCTCCATCAACCGTTTTCCTTGGAAGCAGGTACCATTTTATATTGCAGCCCAACTAACAGGAGCAATATGTGCTTCATACACACTGAGGGTGTTGCTAGAACCAGCAACACAAATTGGTGCCACGTCACCCTCAGGGTCAAACATTCAAGCACTTGTCATGGAAATTGTTGCCACATTCACTATGGTCTTCATATCCGCTGCTGTTGCCACTGACCCTAAAGCTATTGGAGAACTATCAGGGGTAGCAGTAGGTTCTTCAGTTAGCATAGCTAGCATTGTAGCTGGACCAATATCAGGGGGTCAATGA 618 0.4401 MEGMLSLNTEASNDANPKQQSSSLANFAKNYPPSFPRKVLAEIIGTYLLVFVGSGSAGLSAIDENKVSKLGASLAGGFIVTVMIYSIGHISGAHMNPAVSLAFASINRFPWKQVPFYIAAQLTGAICASYTLRVLLEPATQIGATSPSGSNIQALVMEIVATFTMVFISAAVATDPKAIGELSGVAVGSSVSIASIVAGPISGGQ* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2536 205 Gene3D Glycerol uptake facilitator protein. 5 205 IPR023271 -
Ahy4g2536 205 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Ahy4g2536 205 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2536 205 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2536 205 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2536 205 PRINTS Major intrinsic protein family signature 188 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2536 205 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy4g2536 205 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 14 204 - -
Ahy4g2536 205 SUPERFAMILY Aquaporin-like 32 204 IPR023271 -
Ahy4g2536 205 PANTHER AQUAPORIN NIP2-1 14 204 IPR034294 -
Ahy4g2536 205 Pfam Major intrinsic protein 34 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2536 Ahy-Chr4 123239541 123242629 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2536 37 203 Major Intrinsic Protein MIP AT5G37820 49.112 2.26e-49 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2536 K09874 - gmx:100795261 266.159