Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2528 ATGTTTAATCTTATACTCTCTCTCTTAAGTATATTTATATACCATAATTCTAGGGTTAGGGATCTTCACACAGCAGCAAACACGGAATTTGAATCGATAATCATAATCATAATGAGGAGGTACAATCTGAGGAGCAGTGATTCATCAAGGAACCAAGAAAGCAATGATTATTCAAGAGACGTAAGAACGTATGTGAGATACGGAGAGTGTGAGAAGAACCAAGCAGAGCGCATCGGAGGCCACGCCGTCGACGGTTGCAGAGAGTTCATGGCTAGCGGAGCTGAAGGAACACCTCAAGCTCTCACTTGTGCCGCTTGTGGCTGCAACAGAAGCTTCCATAAGCTTGAACTTCGAACGGAGGTTGTTGCCAACCATGGCCGCCATGGTCAAAGCTTACATGGACAGCGCTGA 411 0.455 MFNLILSLLSIFIYHNSRVRDLHTAANTEFESIIIIIMRRYNLRSSDSSRNQESNDYSRDVRTYVRYGECEKNQAERIGGHAVDGCREFMASGAEGTPQALTCAACGCNRSFHKLELRTEVVANHGRHGQSLHGQR* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2528 136 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 42 125 - -
Ahy4g2528 136 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 67 116 IPR006456 -
Ahy4g2528 136 PANTHER MINI ZINC FINGER PROTEIN 1 42 125 - -
Ahy4g2528 136 Pfam ZF-HD protein dimerisation region 65 116 IPR006456 -
Ahy4g2528 136 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 66 116 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2528 Ahy-Chr4 123083697 123084704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2528 61 124 Zinc finger-homeobox gene family AT3G28917 72.308 6.89e-26 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy4g2528 ZF-HD_dimer 3.20E-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2528 - - ahf:112740680 267.314