Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2503 ATGGGTTACCTGAGCAAAACTTCAAGGACTCTAAGGCAATCAAATTACCTCTCTTTATTACGAAATTCAACCCTTTTCCCATTCAACTCATTAAGCAGCACCACCTTTCATCACCAACAGCGTGCACTCTTGTGTTCTCAGTCGCGGCAACAGAACATTAAGGATAAGAGCGCCATAGATTTGAGCCAGTACCCTCCTGAACTCATTCGAAATTTCTCAATCATTGCGCATGTTGATCATGGCAAGTCTACCCTCGCTGATCGACTCCTTGAACTCACTGCTACCATTAAAAAGGGACATGGCCAGCCCCAATATCTTGATAAGTTGCAGGTGGAGAGAGAAAGGGGAATCACAGTTAAAGCACAGACAGCAACAATGTTCTATAAGCACAGGACAAATGGTGATGATCATAGTGAGGGAAAGGATTCACCTAGTTTTTTGCTGAATCTTATTGACACTCCCGGTCATGTGGATTTTAGCTATGAGGTGTCAAGGTCACTAGCAGCTTGTCAAGGCGTACTTTTGGTTGTTGATGCCGCGCAAGGAGTCCAAGCGCAAACTGTTGCTAATTTCTACCTTGCTTTTGAGGCCAACCTGACAATTGTACCTGTAATAAACAAGATTGACCAGCCAACTGCTGATCCTGATCGCGTTAAAGCCCAATTGAAATCAATGTTTGATCTTGACCCTAGTGATGCATTGCTAACATCTGCTAAAACTGGAAAGGGTCTTGAGCAAGTCCTTCCAGCTGTTATAGAGCGCATCCCTCCTCCTCCTGGAAAGAGTGATAGTTCTCTGCGTATGCTTTTGCTTGATTCATACTATGATGAATACAAGGGGGTAATATGCCATGTTGCTGTTGTTGATGGTATCCTGCGCAAGGGGGATAAGATTTCATCTGCTGCTACTGGTCAGTCATATGAAGCTTTGGATATTGGTATCATGCATCCTGAGCTTACACCTACTGGAATCTTGCTTACTGGTCAAGTTGGTTATGTTGTAAGTGGCATGCGTTCAACAAAAGAAGCCCGTGTTGGAGATACAATTTACCATACTCGAAACACTGTAGAGCCTCTCCCAGGATTTAAATCAGCAAAACATATGGTTTTCTCTGGTCTTTATCCAGCAGATGGATCTGATTTTGAAGCACTCAACCATGCAATAGAGAGGCTGACATGTAATGATGCCAGTGTCTCTATTACTAAAGAAACTAGCACAGCTCTAGGTTTGGGTTTCAGGTGTGGATTTCTGGGTTTACTTCACATGGATGTTTTTCATCAACGGCTTGAACAGGAGTATGGAGCTCATGTTATCTCAACTGTTCCTACTGTGCCTTATATATTTGAATATTCTGATGGAAGCAAATTAGAAGTTCAGAATCCTGCTACGTTACCCTCTAATCCCAAGCAACGAGTGACAGCATGTTGGGAACCTACAGTATTAGCTACTATAATCATTCCTAGTGAGTATGTGGGACCAGTTATCACCCTTTGCTCAGAGCGTAGGGGTCAGCAGTTGGAGTACTCATTCATTGACAGTCAACGGGCATTCATGAAGTATCGCATGCCTTTGAGAGAAATTGTTGTCGACTTCTATAATGAATTGAAGAGCATAACATCAGGCTATGCATCATTTGATTATGAGGATGCAGATTATCAGCAATCTGATCTGGTGAAACTCGATATCCTCTTAAATGGACAACCTGTTGATGCGATGTCAACTATTGTTCATAACATGAAAGCATATCGCGTTGGGCGTGAGCTAGTAGAGAAATTGAAGAAAGTCATAGACAGGCAAATGTTTGAGATAACGATACAAGCTGCCATTGCTTCAAAGATTATAGCAAGAGAGACGATTTCTGCGATGAGGAAGAATGTTCTTGCAAAGTGTTACGGTGGCGATGTTACTCGAAAGCGAAAGCTGTTGGAAAAGCAAAAGGAAGGAAAGAAGCGAATGAAACGCATTGGCTCCGTTGATATACCGCAGGAAGCATTCCATGAATTATTGAAGGTTTCATAG 2019 0.4255 MGYLSKTSRTLRQSNYLSLLRNSTLFPFNSLSSTTFHHQQRALLCSQSRQQNIKDKSAIDLSQYPPELIRNFSIIAHVDHGKSTLADRLLELTATIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHRTNGDDHSEGKDSPSFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFEANLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPSDALLTSAKTGKGLEQVLPAVIERIPPPPGKSDSSLRMLLLDSYYDEYKGVICHVAVVDGILRKGDKISSAATGQSYEALDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYHTRNTVEPLPGFKSAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLEVQNPATLPSNPKQRVTACWEPTVLATIIIPSEYVGPVITLCSERRGQQLEYSFIDSQRAFMKYRMPLREIVVDFYNELKSITSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMSTIVHNMKAYRVGRELVEKLKKVIDRQMFEITIQAAIASKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRIGSVDIPQEAFHELLKVS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2503 672 Gene3D - 67 260 IPR027417 -
Ahy4g2503 672 Gene3D Elongation Factor G (Translational Gtpase), domain 3 360 441 - -
Ahy4g2503 672 Gene3D - 442 555 - -
Ahy4g2503 672 CDD lepA_C 477 556 IPR035654 -
Ahy4g2503 672 TIGRFAM lepA: elongation factor 4 68 671 IPR006297 GO:0005525
Ahy4g2503 672 SUPERFAMILY EF-G C-terminal domain-like 476 570 IPR035647 -
Ahy4g2503 672 SUPERFAMILY EF-G C-terminal domain-like 368 445 IPR035647 -
Ahy4g2503 672 Pfam Elongation factor Tu GTP binding domain 69 256 IPR000795 GO:0003924|GO:0005525
Ahy4g2503 672 CDD LepA 70 258 - -
Ahy4g2503 672 Gene3D Translation factors 261 359 - -
Ahy4g2503 672 SUPERFAMILY Translation proteins 257 355 IPR009000 -
Ahy4g2503 672 TIGRFAM small_GTP: small GTP-binding protein domain 72 247 IPR005225 GO:0005525
Ahy4g2503 672 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 67 259 IPR000795 GO:0003924|GO:0005525
Ahy4g2503 672 CDD EF4_II 266 351 - -
Ahy4g2503 672 Gene3D - 556 630 IPR038363 -
Ahy4g2503 672 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 56 670 - -
Ahy4g2503 672 Pfam Elongation factor G C-terminus 477 562 IPR000640 -
Ahy4g2503 672 Pfam GTP-binding protein LepA C-terminus 564 670 IPR013842 -
Ahy4g2503 672 PRINTS GTP-binding elongation factor signature 71 84 IPR000795 GO:0003924|GO:0005525
Ahy4g2503 672 PRINTS GTP-binding elongation factor signature 149 159 IPR000795 GO:0003924|GO:0005525
Ahy4g2503 672 PRINTS GTP-binding elongation factor signature 201 210 IPR000795 GO:0003924|GO:0005525
Ahy4g2503 672 PRINTS GTP-binding elongation factor signature 114 122 IPR000795 GO:0003924|GO:0005525
Ahy4g2503 672 CDD EF4_III 367 442 - -
Ahy4g2503 672 Hamap Elongation factor 4 [lepA]. 65 672 IPR006297 GO:0005525
Ahy4g2503 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 280 IPR027417 -
Ahy4g2503 672 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 107 122 IPR031157 -
Ahy4g2503 672 PANTHER TRANSLATION FACTOR GUF1-RELATED 56 670 IPR006297 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2503 Ahy-Chr4 122705983 122711011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2503 69 210 Eukaryotic Initiation Factors Gene Family AT1G56070 40.278 5.07e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2503 K21594 - gmx:100781092 1184.09