Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2502 ATGGAAGAGAAGAGAGTTAGTGCCATTAGTTTTGAAGATTTTGTTACAAAGGGTGAGATGAAAGAAGAAAATGGAAGGTTGAAGATGATCACAGAAAGAGTAGAAGAGAATTATCACTCTCTTCAACTCCAATTCTTTGATATCCTTACAAAAAAAGCATTCAAAGAAGTTGTGAGTGATTCAGCTACAAACACAATTGGTGATGAAACTGAAGAGGAGCATGAACTTGTTTCACTTTGCCTTGGAAGGAATCCAAGTAAGCATAACAAAGATGTTGCAAGAATTGGAAACAACTCCAAAAACAAGGTTAATAAAGAAAATGAAGAGTTTGAAAAACCATGTTTAACTCTTGGATTAGACTCTAAATGTGTGTTGCCAAAGGAATCAGCAGAAGAAACTTTGTCATCAATAACACAGAAACATCAAGTGAAAGTGAAAAATAGTTCAAATGATGGAAGTTCAGATCAAATGGCTGCTAAGAGAGCCAGAGTTTCTGTTAGAGCTAGATGTAATTCTCCTACGATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGTCCACGAGCATACTATCGTTGCACGGTCGCGCCGGCATGTCCGGTTAGGAAACAGGTGCAAAGATGTGCTGAAGACTTGTCCATCTTGATCACAACATACGAAGGAACACATAACCATCCACTTCCATTTTCAGCATCAGCTATAGCTTCCACCACTTCTGCTGCAGCTTCCATGCTTATTTCAGGTTCTTCAGAGAGTCACAATTCTTCATTTTTTAAAAATGTGTCAACACTACACAGTGGTGTTACTGGTGTATGTCTTGGTCAGCAGTTTGATCAATCAAGAGCAAAAAAAAATGTCTTCCTACCAAACAATAATGTAACTTTAGACCTCACTTCTTCTGCTTCAAACACTTTATTACCTTCAAACACTTCTTCTGCTAACCTTTTCACAATGCCTATTCCTTTTGAGGAGAAAACACACATAATAAGGCCAGTTATGTTGAGAAACTCTTCAAGTTGGGGTAAGCATTTTTATGAAGAGTACACAAGGAACCAAACTCTACATCCTCCAAAGGATGCTTTTTTAGCAGAAACAATAACAAAAGCAATGAAAACAGATCCAAGTCTTCATTCTGTGATAGCTGCTGCAGTTTCATCTATTGTGGGGCAACAAGGATATTCAACAAGTTGCAACAACCAAGAAGGAACAGAGATTCTTATACCTTCAACTCAAGTGGGATCTTCCATTCCCTTCAATCAAAGTAACAAAGGATACATAGAAGGGTACTTCAAAAGATTGTTGTCCTCAAGTTCTGGTGCTGGAGACATGCTTCCATAG 1362 0.3796 MEEKRVSAISFEDFVTKGEMKEENGRLKMITERVEENYHSLQLQFFDILTKKAFKEVVSDSATNTIGDETEEEHELVSLCLGRNPSKHNKDVARIGNNSKNKVNKENEEFEKPCLTLGLDSKCVLPKESAEETLSSITQKHQVKVKNSSNDGSSDQMAAKRARVSVRARCNSPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCAEDLSILITTYEGTHNHPLPFSASAIASTTSAAASMLISGSSESHNSSFFKNVSTLHSGVTGVCLGQQFDQSRAKKNVFLPNNNVTLDLTSSASNTLLPSNTSSANLFTMPIPFEEKTHIIRPVMLRNSSSWGKHFYEEYTRNQTLHPPKDAFLAETITKAMKTDPSLHSVIAAAVSSIVGQQGYSTSCNNQEGTEILIPSTQVGSSIPFNQSNKGYIEGYFKRLLSSSSGAGDMLP* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2502 453 MobiDBLite consensus disorder prediction 135 160 - -
Ahy4g2502 453 Pfam WRKY DNA -binding domain 176 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g2502 453 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 17 450 - -
Ahy4g2502 453 SUPERFAMILY WRKY DNA-binding domain 169 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy4g2502 453 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 17 450 IPR044810 GO:0003700
Ahy4g2502 453 SMART WRKY_cls 175 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g2502 453 ProSiteProfiles WRKY domain profile. 170 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g2502 453 MobiDBLite consensus disorder prediction 135 156 - -
Ahy4g2502 453 Gene3D WRKY domain 159 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2502 Ahy-Chr4 122703441 122705928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2502 19 444 WRKY Transcription Factor Family AT5G15130 38.969 4.88e-67 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy4g2502 WRKY 4.70E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2502 - - adu:107486739 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2847 14 136987652 136990270 Ahy4g2502 4 122703441 122705928 hybridization